Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 RNA5SP302-201ENST00000364896 100 ntBASIC7.29□□□□□ -1.24
TPM2P07951 MIR1231-201ENST00000408101 92 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 RPS10P21-201ENST00000430654 475 ntBASIC7.29□□□□□ -1.24
TPM2P07951 RPL14P5-201ENST00000436474 730 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM2P07951 PCMTD1P3-201ENST00000451824 472 ntBASIC7.29□□□□□ -1.24
TPM2P07951 SCDP1-201ENST00000455244 1081 ntBASIC7.29□□□□□ -1.24
TPM2P07951 MED28P7-201ENST00000456611 530 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM2P07951 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM2P07951 AC025271.1-201ENST00000485045 429 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AC091849.1-201ENST00000509920 121 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM2P07951 RN7SKP242-201ENST00000515967 289 ntBASIC7.29□□□□□ -1.24
TPM2P07951 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 AC140063.1-201ENST00000541343 259 ntBASIC7.29□□□□□ -1.24
TPM2P07951 VDAC2P2-201ENST00000544463 901 ntBASIC7.29□□□□□ -1.24
TPM2P07951 HMGN2P47-201ENST00000559378 272 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM2P07951 TXNP4-201ENST00000575018 310 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AL356986.1-201ENST00000604085 341 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AC024085.1-201ENST00000604299 432 ntBASIC7.29□□□□□ -1.24
TPM2P07951 MIR6807-201ENST00000621968 92 ntBASIC7.29□□□□□ -1.24
TPM2P07951 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM2P07951 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM2P07951 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.29□□□□□ -1.24
TPM2P07951 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM2P07951 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TPM2P07951 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM2P07951 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
TPM2P07951 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM2P07951 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM2P07951 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
TPM2P07951 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM2P07951 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.28□□□□□ -1.24
TPM2P07951 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
TPM2P07951 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TPM2P07951 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AL023284.3-201ENST00000407767 334 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AC027124.1-201ENST00000440852 466 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM2P07951 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM2P07951 PFN1P11-201ENST00000445829 389 ntBASIC7.28□□□□□ -1.24
TPM2P07951 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 RPL23AP68-201ENST00000480924 445 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM2P07951 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 AL049840.5-201ENST00000602827 552 ntBASIC7.28□□□□□ -1.24
TPM2P07951 BUB1P1-201ENST00000603541 607 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AL035417.2-201ENST00000603887 796 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 AL353684.1-201ENST00000622677 1120 ntBASIC7.28□□□□□ -1.24
TPM2P07951 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM2P07951 AC005753.1-201ENST00000623837 618 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AC106782.7-201ENST00000624024 418 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AC133555.5-201ENST00000624430 418 ntBASIC7.28□□□□□ -1.24
TPM2P07951 AL121936.2-201ENST00000641935 662 ntBASIC7.28□□□□□ -1.24
TPM2P07951 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM2P07951 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TPM2P07951 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TPM2P07951 AL121768.1-201ENST00000613917 2544 ntBASIC7.28□□□□□ -1.24
TPM2P07951 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TPM2P07951 SHQ1P1-201ENST00000437111 1544 ntBASIC7.27□□□□□ -1.25
TPM2P07951 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM2P07951 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM2P07951 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM2P07951 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM2P07951 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.27□□□□□ -1.25
TPM2P07951 RNA5SP176-201ENST00000390956 110 ntBASIC7.27□□□□□ -1.25
TPM2P07951 RNU1-56P-201ENST00000391303 164 ntBASIC7.27□□□□□ -1.25
TPM2P07951 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM2P07951 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
TPM2P07951 AL121977.1-201ENST00000401636 979 ntBASIC7.27□□□□□ -1.25
TPM2P07951 AL662791.3-201ENST00000413771 776 ntBASIC7.27□□□□□ -1.25
TPM2P07951 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM2P07951 AL359633.1-201ENST00000421403 310 ntBASIC7.27□□□□□ -1.25
TPM2P07951 AC009362.1-201ENST00000427253 406 ntBASIC7.27□□□□□ -1.25
TPM2P07951 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM2P07951 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM2P07951 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.27□□□□□ -1.25
TPM2P07951 AC005517.1-201ENST00000452091 489 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms