Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL121578.2-201ENST00000448797 447 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SL655P-201ENST00000486087 298 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC096754.1-201ENST00000508904 818 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC139713.1-202ENST00000512366 460 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AP003115.1-201ENST00000569849 463 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 OR7A11P-201ENST00000597719 953 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC025171.4-201ENST00000607250 1047 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC093635.1-201ENST00000609028 555 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL132656.3-201ENST00000606384 1595 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AP002370.1-201ENST00000528055 1602 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL356806.1-201ENST00000422524 916 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC099340.1-201ENST00000475247 599 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC025181.1-201ENST00000477507 416 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC135999.1-201ENST00000478962 479 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 RNA5SP96-201ENST00000516041 107 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SKP98-201ENST00000517070 156 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 CHEK2P2-201ENST00000554701 672 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC090079.2-201ENST00000575289 768 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 BUB1P1-201ENST00000603541 607 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC012175.1-201ENST00000603755 531 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC091059.2-201ENST00000623355 614 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC018692.2-201ENST00000624130 348 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AC022613.3-201ENST00000560740 1346 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 AL137058.3-201ENST00000624531 3099 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 RBPJP6-201ENST00000411556 1431 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 API5P1-201ENST00000424316 1510 ntBASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP3Q96JB5 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP3Q96JB5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms