Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC106800.3-201ENST00000511389 308 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 MIR3691-201ENST00000578066 90 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 RPSAP73-201ENST00000614820 330 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL355377.1-201ENST00000621125 1653 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 MROH3P-201ENST00000435735 2676 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 MAPK10-287ENST00000641217 3037 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL109941.1-201ENST00000401925 229 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 FTH1P10-202ENST00000430907 550 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SNORA70.20-201ENST00000516848 126 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL445665.1-202ENST00000452436 324 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL355032.1-201ENST00000472981 438 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RNA5SP228-201ENST00000516232 133 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AP001858.2-201ENST00000536213 601 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 MIR3189-201ENST00000578735 73 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL731566.2-201ENST00000618971 317 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 OR1N1-202ENST00000619659 939 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 GABARAPL3-201ENST00000412799 354 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL596448.1-201ENST00000415024 392 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ELOCP3-201ENST00000439303 348 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SPRYD7P1-201ENST00000443861 570 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL139407.1-201ENST00000613826 1175 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC127070.3-201ENST00000503695 3263 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RN7SKP161-201ENST00000411110 305 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 RPL37P18-201ENST00000411602 243 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms