Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC129492.5-201ENST00000603489 315 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL590410.1-201ENST00000617925 333 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC009878.1-201ENST00000621819 340 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AF246928.1-201ENST00000623768 87 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL445250.1-203ENST00000641829 1535 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 NCLP2-201ENST00000416078 1462 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC006042.3-201ENST00000454684 1469 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC015871.4-201ENST00000624650 2260 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 FAM133CP-201ENST00000332869 704 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 U3.1-201ENST00000362500 215 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 RN7SKP77-201ENST00000363261 353 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 SNORA68-201ENST00000384437 133 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 U3.28-201ENST00000391249 210 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC092952.1-201ENST00000397646 1209 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 KRT18P52-201ENST00000404956 846 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MIR548F1-201ENST00000408667 84 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 VN1R33P-201ENST00000411800 887 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC091492.1-201ENST00000419844 272 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC021876.1-201ENST00000425959 359 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 RPL5P27-201ENST00000437011 881 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC122718.1-201ENST00000439448 744 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MRPL35P4-201ENST00000453682 566 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 RPS6P2-201ENST00000454208 705 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 FAM133DP-201ENST00000464802 691 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC104763.1-201ENST00000475274 360 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 RN7SL124P-201ENST00000498656 285 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MTCO1P31-201ENST00000506355 492 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC233724.10-201ENST00000510454 409 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 IGLV10-67-201ENST00000519446 325 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 RPL41P2-201ENST00000544920 409 ntBASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.85□□□□□ -1.31
ATG4DQ86TL0 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms