Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 AL669831.5-218ENST00000591702 1873 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 RAB5CP1-201ENST00000395972 580 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK2P53671 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 AL359885.1-201ENST00000415786 903 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK2P53671 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 OR6R1P-201ENST00000431838 940 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 AC009237.1-201ENST00000442127 744 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 AC007383.1-201ENST00000445875 636 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 TVP23CP1-201ENST00000450317 639 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 AC022415.1-202ENST00000486612 523 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 RNA5SP473-201ENST00000516402 125 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK2P53671 AC008429.2-201ENST00000523057 864 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 OR4A41P-201ENST00000533053 928 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK2P53671 MRPL57P1-201ENST00000621486 265 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 RAB28P4-201ENST00000622233 665 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIMK2P53671 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK2P53671 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK2P53671 AC011455.2-201ENST00000599320 3336 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 CAP1P2-201ENST00000417455 1409 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LIMK2P53671 SNORD8-201ENST00000363915 110 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 AL929472.1-201ENST00000417484 429 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK2P53671 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK2P53671 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK2P53671 TIMM8BP2-201ENST00000445940 251 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 RN7SL165P-201ENST00000477476 291 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK2P53671 GUSBP9-201ENST00000510138 584 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 SCARNA5-201ENST00000516201 276 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.51□□□□□ -1.37
LIMK2P53671 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 AL121579.2-201ENST00000555466 590 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC233702.7-202ENST00000582941 211 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC093635.1-201ENST00000609028 555 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 MIR7109-201ENST00000613748 65 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 MIR7854-201ENST00000620068 65 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.51□□□□□ -1.37
LIMK2P53671 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK2P53671 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK2P53671 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK2P53671 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 PSMC1P4-201ENST00000515236 1327 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK2P53671 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK2P53671 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK2P53671 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK2P53671 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
LIMK2P53671 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK2P53671 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK2P53671 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK2P53671 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK2P53671 OR7A2P-201ENST00000304105 930 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LIMK2P53671 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK2P53671 TRGV5P-201ENST00000419915 354 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 RPL23AP85-201ENST00000421838 433 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 AC003989.1-201ENST00000434569 565 ntBASIC6.5□□□□□ -1.37
LIMK2P53671 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK2P53671 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK2P53671 VN1R38P-201ENST00000450265 887 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms