Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDX1P47902 AL512353.3-201ENST00000417517 1326 ntBASIC5.48□□□□□ -1.53
CDX1P47902 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDX1P47902 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
CDX1P47902 GTF2IP4-201ENST00000453092 2054 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AC025809.2-201ENST00000625085 1802 ntBASIC5.47□□□□□ -1.53
CDX1P47902 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 STAG3L4-201ENST00000352103 530 ntBASIC5.47□□□□□ -1.53
CDX1P47902 RNU6-819P-201ENST00000364116 107 ntBASIC5.47□□□□□ -1.53
CDX1P47902 MIR99A-201ENST00000384906 81 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AL590762.1-201ENST00000391782 432 ntBASIC5.47□□□□□ -1.53
CDX1P47902 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 ARAFP1-201ENST00000422172 605 ntBASIC5.47□□□□□ -1.53
CDX1P47902 MYL6P3-201ENST00000436904 432 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AL604028.2-201ENST00000437848 788 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.47□□□□□ -1.53
CDX1P47902 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AL845321.1-201ENST00000444603 348 ntBASIC5.47□□□□□ -1.53
CDX1P47902 SDHCP3-201ENST00000445371 506 ntBASIC5.47□□□□□ -1.53
CDX1P47902 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AL354714.5-201ENST00000450131 590 ntBASIC5.47□□□□□ -1.53
CDX1P47902 ST13P21-201ENST00000453250 1098 ntBASIC5.47□□□□□ -1.53
CDX1P47902 RPS14P8-201ENST00000478778 369 ntBASIC5.47□□□□□ -1.53
CDX1P47902 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.47□□□□□ -1.53
CDX1P47902 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.47□□□□□ -1.53
CDX1P47902 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 RFPL4AP3-201ENST00000515267 345 ntBASIC5.47□□□□□ -1.53
CDX1P47902 RN7SKP11-201ENST00000517018 287 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.47□□□□□ -1.53
CDX1P47902 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.47□□□□□ -1.53
CDX1P47902 OR4A1P-201ENST00000532342 920 ntBASIC5.47□□□□□ -1.53
CDX1P47902 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AC096708.2-201ENST00000577676 512 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 AL583832.1-201ENST00000603227 784 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AL133406.3-201ENST00000606817 541 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AC008626.2-201ENST00000624425 248 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AC127071.1-201ENST00000624997 712 ntBASIC5.47□□□□□ -1.53
CDX1P47902 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 AC005725.1-201ENST00000577346 2607 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AP002512.4-202ENST00000641599 4530 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.47□□□□□ -1.53
CDX1P47902 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 CAP1P2-201ENST00000417455 1409 ntBASIC5.47□□□□□ -1.53
CDX1P47902 AC092111.2-201ENST00000611627 1414 ntBASIC5.47□□□□□ -1.53
CDX1P47902 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDX1P47902 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 AL731556.1-201ENST00000394628 3711 ntBASIC5.47□□□□□ -1.53
CDX1P47902 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDX1P47902 AC119674.1-204ENST00000641348 1343 ntBASIC5.47□□□□□ -1.53
CDX1P47902 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.47□□□□□ -1.53
CDX1P47902 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CDX1P47902 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDX1P47902 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.46□□□□□ -1.53
CDX1P47902 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDX1P47902 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.46□□□□□ -1.53
CDX1P47902 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDX1P47902 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.46□□□□□ -1.53
CDX1P47902 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CDX1P47902 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDX1P47902 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 DHFRP5-201ENST00000406944 564 ntBASIC5.46□□□□□ -1.54
CDX1P47902 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.46□□□□□ -1.54
CDX1P47902 VN1R66P-201ENST00000412929 916 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 YWHAZP5-201ENST00000419975 730 ntBASIC5.46□□□□□ -1.54
CDX1P47902 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms