Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC114546.4-201ENST00000624413 369 ntBASIC6.01□□□□□ -1.45
RFC3P40938 AC099654.11-201ENST00000638857 294 ntBASIC6.01□□□□□ -1.45
RFC3P40938 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.01□□□□□ -1.45
RFC3P40938 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.01□□□□□ -1.45
RFC3P40938 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RFC3P40938 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC3P40938 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
RFC3P40938 OLMALINC-203ENST00000641087 3779 ntBASIC6.01□□□□□ -1.45
RFC3P40938 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RFC3P40938 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 CDY3P-201ENST00000454543 1618 ntBASIC6□□□□□ -1.45
RFC3P40938 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 RPL11P4-201ENST00000332269 436 ntBASIC6□□□□□ -1.45
RFC3P40938 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RFC3P40938 PSMA6P1-201ENST00000400275 741 ntBASIC6□□□□□ -1.45
RFC3P40938 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 RN7SKP86-201ENST00000410454 332 ntBASIC6□□□□□ -1.45
RFC3P40938 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 PLA2G12AP2-201ENST00000424744 264 ntBASIC6□□□□□ -1.45
RFC3P40938 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6□□□□□ -1.45
RFC3P40938 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 CRYGGP-201ENST00000443337 145 ntBASIC6□□□□□ -1.45
RFC3P40938 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 AC118758.1-202ENST00000454719 225 ntBASIC6□□□□□ -1.45
RFC3P40938 SULT1D1P-201ENST00000458020 882 ntBASIC6□□□□□ -1.45
RFC3P40938 AC113367.2-201ENST00000505749 160 ntBASIC6□□□□□ -1.45
RFC3P40938 AC112484.3-201ENST00000505910 329 ntBASIC6□□□□□ -1.45
RFC3P40938 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 RNA5SP441-201ENST00000516809 88 ntBASIC6□□□□□ -1.45
RFC3P40938 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 AC008429.2-201ENST00000523057 864 ntBASIC6□□□□□ -1.45
RFC3P40938 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 AC004232.1-201ENST00000571388 208 ntBASIC6□□□□□ -1.45
RFC3P40938 RN7SL270P-201ENST00000579643 281 ntBASIC6□□□□□ -1.45
RFC3P40938 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6□□□□□ -1.45
RFC3P40938 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6□□□□□ -1.45
RFC3P40938 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 AL138960.1-201ENST00000613838 513 ntBASIC6□□□□□ -1.45
RFC3P40938 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 AP000577.1-201ENST00000624366 878 ntBASIC6□□□□□ -1.45
RFC3P40938 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RFC3P40938 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6□□□□□ -1.45
RFC3P40938 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6□□□□□ -1.45
RFC3P40938 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 AC087392.3-202ENST00000358446 1754 ntBASIC6□□□□□ -1.45
RFC3P40938 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6□□□□□ -1.45
RFC3P40938 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC3P40938 AL591848.4-201ENST00000567832 3472 ntBASIC6□□□□□ -1.45
RFC3P40938 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.99□□□□□ -1.45
RFC3P40938 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.99□□□□□ -1.45
RFC3P40938 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 RNA5SP512-201ENST00000364550 120 ntBASIC5.99□□□□□ -1.45
RFC3P40938 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.99□□□□□ -1.45
RFC3P40938 MRPS21P5-201ENST00000417885 231 ntBASIC5.99□□□□□ -1.45
RFC3P40938 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.99□□□□□ -1.45
RFC3P40938 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFC3P40938 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.99□□□□□ -1.45
RFC3P40938 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.99□□□□□ -1.45
RFC3P40938 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms