Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
APOEP02649 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 RN7SKP38-201ENST00000410782 309 ntBASIC6.79□□□□□ -1.32
APOEP02649 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AC003989.1-201ENST00000434569 565 ntBASIC6.79□□□□□ -1.32
APOEP02649 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
APOEP02649 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.79□□□□□ -1.32
APOEP02649 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
APOEP02649 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.79□□□□□ -1.32
APOEP02649 AL078623.1-201ENST00000602702 907 ntBASIC6.79□□□□□ -1.32
APOEP02649 AC015819.1-201ENST00000613588 663 ntBASIC6.79□□□□□ -1.32
APOEP02649 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.79□□□□□ -1.32
APOEP02649 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 AC034229.2-201ENST00000566945 2508 ntBASIC6.79□□□□□ -1.32
APOEP02649 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 AC013268.3-201ENST00000262716 2324 ntBASIC6.78□□□□□ -1.32
APOEP02649 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 AC005702.3-201ENST00000585345 1447 ntBASIC6.78□□□□□ -1.32
APOEP02649 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 RNU1-84P-201ENST00000365447 164 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.78□□□□□ -1.32
APOEP02649 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.78□□□□□ -1.32
APOEP02649 AL353626.3-201ENST00000413399 657 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.78□□□□□ -1.32
APOEP02649 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.78□□□□□ -1.32
APOEP02649 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.78□□□□□ -1.32
APOEP02649 AC234771.2-201ENST00000445718 597 ntBASIC6.78□□□□□ -1.32
APOEP02649 RPS7P10-201ENST00000464254 603 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC044810.1-201ENST00000480271 711 ntBASIC6.78□□□□□ -1.32
APOEP02649 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 RPL5P14-201ENST00000494197 878 ntBASIC6.78□□□□□ -1.32
APOEP02649 FTH1P8-201ENST00000498161 514 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.78□□□□□ -1.32
APOEP02649 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 AC093664.1-201ENST00000511779 289 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 SUMO2P19-201ENST00000518920 295 ntBASIC6.78□□□□□ -1.32
APOEP02649 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 AC124891.1-201ENST00000536322 519 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 TDGP1-201ENST00000543961 1229 ntBASIC6.78□□□□□ -1.32
APOEP02649 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.78□□□□□ -1.32
APOEP02649 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.78□□□□□ -1.32
APOEP02649 AC137695.1-201ENST00000604126 489 ntBASIC6.78□□□□□ -1.32
APOEP02649 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.78□□□□□ -1.32
APOEP02649 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
APOEP02649 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.78□□□□□ -1.32
APOEP02649 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
APOEP02649 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.78□□□□□ -1.32
APOEP02649 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
APOEP02649 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
APOEP02649 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
APOEP02649 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms