Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 AC011270.1-201ENST00000558606 583 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC009268.1-201ENST00000561352 1203 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC138207.8-204ENST00000579588 527 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.9□□□□□ -1.46
ZIC3O60481 WBP1LP12-201ENST00000604449 331 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 AC104307.1-201ENST00000616142 196 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 MIR6085-201ENST00000618314 110 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AL132796.3-201ENST00000624703 900 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ZIC3O60481 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZIC3O60481 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZIC3O60481 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.9□□□□□ -1.47
ZIC3O60481 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.9□□□□□ -1.47
ZIC3O60481 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 SALL4P7-201ENST00000555779 3120 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 OR4G1P-202ENST00000641173 1788 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ZIC3O60481 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ZIC3O60481 RPL23AP85-201ENST00000421838 433 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 EIF2S2P3-201ENST00000428356 999 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 AC013410.1-201ENST00000436223 1232 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.89□□□□□ -1.47
ZIC3O60481 AC005165.2-201ENST00000466070 380 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 EIF4E2P2-201ENST00000492033 736 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.89□□□□□ -1.47
ZIC3O60481 AL133399.1-201ENST00000527476 298 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 OR52K3P-201ENST00000531655 943 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC124891.1-201ENST00000536322 519 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.89□□□□□ -1.47
ZIC3O60481 AC090286.3-201ENST00000573133 187 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 AC090079.2-201ENST00000575289 768 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 MIR5095-201ENST00000578844 88 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 SETP3-201ENST00000581726 813 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AL589765.6-201ENST00000601909 549 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC092474.3-201ENST00000603022 568 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AL953862.2-201ENST00000603089 820 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC011891.2-201ENST00000604949 397 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AC117490.2-201ENST00000610042 594 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.89□□□□□ -1.47
ZIC3O60481 AL391262.2-201ENST00000622466 494 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 AL450226.2-201ENST00000622913 439 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.89□□□□□ -1.47
ZIC3O60481 LINC02495-203ENST00000636704 242 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ZIC3O60481 SMG1P5-202ENST00000529428 4219 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 SMG1P2-201ENST00000566127 4221 ntBASIC5.89□□□□□ -1.47
ZIC3O60481 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ZIC3O60481 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
ZIC3O60481 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZIC3O60481 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.89□□□□□ -1.47
ZIC3O60481 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
ZIC3O60481 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZIC3O60481 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ZIC3O60481 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZIC3O60481 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZIC3O60481 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZIC3O60481 LPAL2-203ENST00000454031 2498 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms