Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC106800.3-201ENST00000511389 308 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 RN7SKP98-201ENST00000517070 156 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC011853.1-201ENST00000518911 454 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AP004607.6-201ENST00000525033 1202 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AL121579.2-201ENST00000555466 590 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 MIR4701-201ENST00000583094 63 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AP005136.2-201ENST00000583253 1049 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 RN7SL261P-201ENST00000613441 282 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 MIR6778-201ENST00000617912 73 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC025262.3-201ENST00000623666 360 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AP001962.1-201ENST00000624114 559 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 PARP4P1-201ENST00000435945 2337 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 RN7SKP237-201ENST00000364663 301 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 SNORA77.2-201ENST00000408571 112 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AC009500.1-201ENST00000420684 583 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 EIF5AP4-201ENST00000441206 465 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AL139156.3-201ENST00000454802 394 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 NPIPB14P-203ENST00000532298 987 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 RPA2P3-201ENST00000533268 770 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AC005632.2-201ENST00000564271 828 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 AC097641.3-201ENST00000613523 464 ntBASIC5.71□□□□□ -1.49
KIAA1549Q9HCM3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AL353743.3-201ENST00000442109 1468 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AC099782.1-201ENST00000425889 474 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 RPSAP65-201ENST00000429660 595 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 CDY10P-201ENST00000452415 1567 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 RN7SL165P-201ENST00000477476 291 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 MIR7159-201ENST00000620587 66 ntBASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.71□□□□□ -1.5
KIAA1549Q9HCM3 FO082842.1-201ENST00000423552 1370 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms