Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 HIGD1AP16-201ENST00000450986 258 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 RPL15P21-201ENST00000495592 567 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 CYCSP22-201ENST00000517555 339 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 GLRXP2-201ENST00000555594 321 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 RN7SL708P-201ENST00000580952 299 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AL359513.1-201ENST00000614364 557 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 Z99129.4-201ENST00000624649 2435 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 RNU1-134P-201ENST00000362935 165 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 RN7SKP124-201ENST00000364730 341 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC146944.3-201ENST00000509969 371 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AL157899.1-201ENST00000604110 936 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AL512329.2-201ENST00000607350 548 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 CASC19-264ENST00000641912 1184 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 COX6CP17-201ENST00000421389 185 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 RPL7AP6-201ENST00000477943 801 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC067931.1-201ENST00000624190 671 ntBASIC5.95□□□□□ -1.46
CHD8Q9HCK8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHD8Q9HCK8 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC092724.1-201ENST00000624623 3397 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 RPL17P36-201ENST00000420302 549 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AL121916.1-201ENST00000429405 308 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC092967.1-201ENST00000449016 481 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 SIAH1P1-201ENST00000479411 923 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC108688.1-201ENST00000485817 713 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC021220.1-201ENST00000507445 630 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC068831.8-201ENST00000620171 435 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC034111.1-201ENST00000562143 3770 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms