Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 WDR82P2-201ENST00000444540 928 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 RPS4XP17-201ENST00000479057 754 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC018558.5-201ENST00000565840 952 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC012175.1-201ENST00000603755 531 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 SNORD96A-201ENST00000606577 79 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AL445649.1-201ENST00000615941 691 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 RPL12P23-201ENST00000405880 490 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 U3.43-201ENST00000410734 213 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 TMA16P2-201ENST00000413187 601 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AL589794.1-201ENST00000424971 390 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AL022324.2-201ENST00000434827 780 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 RN7SL83P-201ENST00000468131 297 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 RPL5P14-201ENST00000494197 878 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC139713.1-202ENST00000512366 460 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC084851.2-201ENST00000530377 364 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC018659.2-201ENST00000624690 715 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 CLUHP10-201ENST00000631979 980 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 USP9YP3-201ENST00000434481 1766 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 AC009135.2-201ENST00000624136 1768 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 FANCD2P2-201ENST00000437591 1400 ntBASIC6.66□□□□□ -1.34
PCDH9Q9HC56 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDH9Q9HC56 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR7A2P-201ENST00000304105 930 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 OR11H13P-201ENST00000359695 979 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 RN7SKP237-201ENST00000364663 301 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 LCN1P2-201ENST00000372030 223 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 RANP6-201ENST00000413691 644 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 BMP6P1-201ENST00000431230 679 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 RPS7P11-201ENST00000484240 586 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC131392.1-201ENST00000506490 633 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 MTND2P7-201ENST00000521337 640 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 RN7SL208P-201ENST00000577964 296 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC024267.2-201ENST00000582737 417 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AL034374.2-201ENST00000605281 548 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 AC024255.1-201ENST00000614376 102 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms