Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 PARP4P1-201ENST00000435945 2337 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC087392.3-202ENST00000358446 1754 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CDY19P-201ENST00000411668 1613 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CDY18P-201ENST00000438294 1609 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 RNU4-81P-201ENST00000363561 144 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 RNU6-609P-201ENST00000365459 107 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC069282.1-201ENST00000411911 526 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 MTND4LP17-201ENST00000414607 293 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CHCHD3P1-201ENST00000425516 676 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL356121.1-201ENST00000442911 156 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL133480.2-201ENST00000456723 487 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 WBP1LP1-201ENST00000460451 896 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 TRBV8-1-201ENST00000481590 279 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 VTA1P2-201ENST00000520205 911 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC087752.2-201ENST00000521219 281 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 CKS1BP1-201ENST00000555221 240 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL031846.1-201ENST00000560933 314 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC090286.3-201ENST00000573133 187 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 COX6CP16-201ENST00000603667 216 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC013244.3-201ENST00000605614 388 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC091768.1-201ENST00000609258 930 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC074276.2-201ENST00000619891 348 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC117503.3-201ENST00000623811 601 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 AC135068.11-201ENST00000636378 921 ntBASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AMBRA1Q9C0C7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AP002370.1-201ENST00000528055 1602 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RNA5SP429-201ENST00000363688 109 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AL451142.1-201ENST00000375867 775 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AMZ2P2-201ENST00000406819 1057 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AL157698.1-201ENST00000415190 1011 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms