Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 MIR6889-201ENST00000613185 59 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC005514.1-201ENST00000623521 208 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC061999.1-201ENST00000624454 177 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC074141.1-201ENST00000588129 2995 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 LINC01616-201ENST00000561816 2280 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AL590635.1-201ENST00000406314 586 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC010086.1-201ENST00000437359 1052 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AL356121.1-201ENST00000442911 156 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 NPM1P9-201ENST00000453156 844 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 TAAR4P-201ENST00000454843 1039 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 RPL5P12-201ENST00000477071 851 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 RN7SL502P-201ENST00000481857 290 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC112184.1-201ENST00000505179 312 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 NACAP5-201ENST00000509863 636 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC116917.1-201ENST00000520558 305 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC090286.3-201ENST00000573133 187 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC004232.2-201ENST00000574245 821 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 MIR4301-201ENST00000577203 66 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC022387.2-201ENST00000604050 448 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 MIR6780B-201ENST00000610307 79 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC004241.2-201ENST00000614562 444 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC211486.4-201ENST00000621495 113 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 MIR6823-201ENST00000622118 61 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AL139254.3-201ENST00000641097 674 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC007485.2-201ENST00000623493 1667 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AL136531.3-201ENST00000624378 3658 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 PARP4P1-201ENST00000435945 2337 ntBASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.97□□□□□ -1.13
CHMP4CQ96CF2 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 AP000866.6-201ENST00000638898 3579 ntBASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 AC007012.2-201ENST00000623206 1676 ntBASIC7.96□□□□□ -1.13
CHMP4CQ96CF2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 MIR191-201ENST00000384873 92 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL034417.1-201ENST00000399343 800 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC019070.1-201ENST00000415008 1024 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 CDC42P6-201ENST00000421246 576 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL596268.1-201ENST00000427910 1048 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC013403.1-201ENST00000436954 263 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC114878.1-201ENST00000441166 358 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC234771.4-201ENST00000441416 730 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 KF459542.1-201ENST00000450908 553 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 RARRES2P3-201ENST00000457739 473 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms