Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 RNU1-46P-201ENST00000384425 164 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 MIR323B-201ENST00000385269 82 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 HLA-DPA3-207ENST00000454398 229 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 OR13C1P-201ENST00000457612 963 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 RNA5SP340-201ENST00000517132 107 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC079905.1-201ENST00000549280 475 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AL121579.2-201ENST00000555466 590 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AL953862.2-201ENST00000603089 820 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC073333.2-201ENST00000603589 769 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 MIR8089-201ENST00000620165 82 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 SNX18P12-201ENST00000624821 759 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 NBPF8-201ENST00000583271 5330 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 AP000641.1-201ENST00000531988 1639 ntBASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM1Q2M3G4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC073342.2-201ENST00000595842 1800 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 BX322650.1-201ENST00000332359 2143 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 GAPDHP16-201ENST00000448152 962 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC083906.1-201ENST00000509298 406 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC027369.2-201ENST00000528030 440 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC090616.1-201ENST00000583895 447 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC027243.2-201ENST00000602530 724 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 AC004801.6-201ENST00000616571 978 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ZNF658B-201ENST00000602828 3408 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM1Q2M3G4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 SPATA31C1-201ENST00000420021 3895 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC093225.1-201ENST00000506867 1408 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 OR2M1P-201ENST00000318104 951 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms