Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC239367.3-201ENST00000428996 814 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AL451136.1-201ENST00000435399 325 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CL1P78423 RPL23AP28-201ENST00000448062 470 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.38□□□□□ -1.55
CX3CL1P78423 TREML3P-201ENST00000457327 501 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CL1P78423 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.38□□□□□ -1.55
CX3CL1P78423 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC021146.11-201ENST00000503319 491 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CL1P78423 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC117525.1-201ENST00000515228 503 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC096661.1-201ENST00000515870 822 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 IGKV2D-38-201ENST00000518423 240 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC087752.2-201ENST00000521219 281 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC005000.1-201ENST00000536192 288 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC023080.1-201ENST00000551663 931 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AL590032.1-201ENST00000604920 252 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC015802.5-201ENST00000607478 399 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC009032.1-201ENST00000617574 431 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC106782.7-201ENST00000624024 418 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AC133555.5-201ENST00000624430 418 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 Z97989.1-201ENST00000531702 2421 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AP003486.1-201ENST00000525716 3994 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC079949.2-201ENST00000617117 2933 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CL1P78423 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CX3CL1P78423 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CX3CL1P78423 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AL512504.1-201ENST00000415494 778 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 VN1R31P-201ENST00000417498 730 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 MTND2P11-201ENST00000423638 648 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 AL590623.1-201ENST00000427864 105 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC017007.1-201ENST00000511960 415 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC130366.1-201ENST00000526505 1192 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 SLC25A51P2-201ENST00000535708 889 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC140063.1-201ENST00000541343 259 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.37□□□□□ -1.55
CX3CL1P78423 OR7E19P-202ENST00000589942 844 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 AL352984.2-201ENST00000611153 546 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 AC005858.3-201ENST00000624756 589 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms