Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SMG1P2-201ENST00000566127 4221 ntBASIC7.77□□□□□ -1.16
RHBDL3P58872 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.77□□□□□ -1.17
RHBDL3P58872 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.77□□□□□ -1.17
RHBDL3P58872 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RHBDL3P58872 RN7SKP237-201ENST00000364663 301 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RHBDL3P58872 CBX1P3-201ENST00000413296 527 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 MTND2P12-201ENST00000417560 1252 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 RPL23AP85-201ENST00000421838 433 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 VDAC1P2-201ENST00000423609 850 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.77□□□□□ -1.17
RHBDL3P58872 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
RHBDL3P58872 RAD1P2-201ENST00000446414 663 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 OR13C1P-201ENST00000457612 963 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.77□□□□□ -1.17
RHBDL3P58872 AP002884.1-201ENST00000479691 655 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC106800.2-201ENST00000514009 1103 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 MAST4-IT1-201ENST00000514241 658 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 CYCSP25-201ENST00000525280 316 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC092375.1-201ENST00000550410 637 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.77□□□□□ -1.17
RHBDL3P58872 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.77□□□□□ -1.17
RHBDL3P58872 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC124916.2-201ENST00000604416 224 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 AL353684.1-201ENST00000622677 1120 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.77□□□□□ -1.17
RHBDL3P58872 MAPK10-350ENST00000641777 965 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
RHBDL3P58872 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 AKAP17BP-201ENST00000431706 2719 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RHBDL3P58872 AC023245.2-201ENST00000530760 2978 ntBASIC7.77□□□□□ -1.17
RHBDL3P58872 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.77□□□□□ -1.17
RHBDL3P58872 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.76□□□□□ -1.17
RHBDL3P58872 CCAT2-201ENST00000630920 1752 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
RHBDL3P58872 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AL353743.3-201ENST00000442109 1468 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 RNA5SP115-201ENST00000411160 107 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 RN7SKP108-201ENST00000411367 328 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AC091390.2-201ENST00000432573 374 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.76□□□□□ -1.17
RHBDL3P58872 AL390728.3-201ENST00000452704 270 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AC144530.1-201ENST00000452862 555 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.76□□□□□ -1.17
RHBDL3P58872 Z83838.1-202ENST00000456225 839 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AC022415.1-202ENST00000486612 523 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 SNORA48.9-201ENST00000516419 162 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 RNA5SP206-201ENST00000516703 121 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.76□□□□□ -1.17
RHBDL3P58872 TOMM20P1-201ENST00000534518 427 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.76□□□□□ -1.17
RHBDL3P58872 MIR4310-201ENST00000582950 57 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AL589863.1-201ENST00000595383 631 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 DYNLL1P1-201ENST00000595442 269 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 BUB1P1-201ENST00000603541 607 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 GMCL1P2-201ENST00000605230 823 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.76□□□□□ -1.17
RHBDL3P58872 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.76□□□□□ -1.17
RHBDL3P58872 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 MIR6085-201ENST00000618314 110 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.76□□□□□ -1.17
RHBDL3P58872 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 BRD7P6-201ENST00000431406 1860 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.76□□□□□ -1.17
RHBDL3P58872 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms