Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.41□□□□□ -1.38
HNF4AP41235 AC067852.5-201ENST00000589299 310 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.41□□□□□ -1.38
HNF4AP41235 AC097467.4-201ENST00000605504 141 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 AL008582.1-201ENST00000609612 442 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 AL137000.1-201ENST00000610528 1244 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 MIR6070-201ENST00000613967 103 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 AC005277.2-201ENST00000617898 390 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.41□□□□□ -1.38
HNF4AP41235 AP000550.3-201ENST00000637734 379 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 AC062022.1-201ENST00000451026 1684 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 CASC19-228ENST00000641414 1684 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HNF4AP41235 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.41□□□□□ -1.38
HNF4AP41235 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HNF4AP41235 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HNF4AP41235 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.41□□□□□ -1.38
HNF4AP41235 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HNF4AP41235 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HNF4AP41235 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.41□□□□□ -1.38
HNF4AP41235 API5P1-201ENST00000424316 1510 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HNF4AP41235 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC022034.1-201ENST00000512867 2156 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 FAM32BP-201ENST00000344033 333 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 RNA5SP321-201ENST00000362722 111 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 RN7SKP191-201ENST00000364713 306 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HNF4AP41235 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HNF4AP41235 AHCYP8-201ENST00000425108 209 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.4□□□□□ -1.38
HNF4AP41235 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 RN7SL372P-201ENST00000461982 298 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HNF4AP41235 RN7SL350P-201ENST00000492591 299 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 H3F3AP3-201ENST00000497682 407 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AC009567.2-201ENST00000502989 349 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 OR52K3P-201ENST00000531655 943 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AC007068.2-201ENST00000543168 395 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AL162632.2-201ENST00000553933 399 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.4□□□□□ -1.38
HNF4AP41235 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.4□□□□□ -1.38
HNF4AP41235 AL049840.5-201ENST00000602827 552 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AC091133.5-201ENST00000603088 301 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AL356986.1-201ENST00000604085 341 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 RPL12P48-201ENST00000605620 304 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 AL356752.1-201ENST00000615844 593 ntBASIC6.4□□□□□ -1.38
HNF4AP41235 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HNF4AP41235 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HNF4AP41235 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HNF4AP41235 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HNF4AP41235 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HNF4AP41235 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HNF4AP41235 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
HNF4AP41235 MKI67P1-201ENST00000604297 1460 ntBASIC6.4□□□□□ -1.39
HNF4AP41235 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 AC022905.1-201ENST00000503430 3048 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HNF4AP41235 TNPO1P2-201ENST00000426249 2665 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC105749.1-201ENST00000631338 2008 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 RNA5SP382-201ENST00000363355 112 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 RN7SKP118-201ENST00000364331 330 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC092634.1-201ENST00000366505 199 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HNF4AP41235 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HNF4AP41235 RPL7P58-201ENST00000402913 758 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC006509.1-201ENST00000420788 634 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms