Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.69□□□□□ -1.34
RETP07949 U3.52-201ENST00000384034 216 ntBASIC6.69□□□□□ -1.34
RETP07949 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 RPSAP65-201ENST00000429660 595 ntBASIC6.69□□□□□ -1.34
RETP07949 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 CLUHP1-201ENST00000435012 1190 ntBASIC6.69□□□□□ -1.34
RETP07949 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 RPL23AP28-201ENST00000448062 470 ntBASIC6.69□□□□□ -1.34
RETP07949 OR52I1-201ENST00000450052 1050 ntBASIC6.69□□□□□ -1.34
RETP07949 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 AC068522.1-201ENST00000482895 345 ntBASIC6.69□□□□□ -1.34
RETP07949 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 AC027308.1-201ENST00000517993 110 ntBASIC6.69□□□□□ -1.34
RETP07949 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 CYCSP25-201ENST00000525280 316 ntBASIC6.69□□□□□ -1.34
RETP07949 NPIPB14P-203ENST00000532298 987 ntBASIC6.69□□□□□ -1.34
RETP07949 RPL3P13-201ENST00000550415 216 ntBASIC6.69□□□□□ -1.34
RETP07949 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 AC018558.5-201ENST00000565840 952 ntBASIC6.69□□□□□ -1.34
RETP07949 SNORA70D-201ENST00000578836 135 ntBASIC6.69□□□□□ -1.34
RETP07949 AC026898.1-201ENST00000586404 571 ntBASIC6.69□□□□□ -1.34
RETP07949 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 AC091167.5-201ENST00000605689 894 ntBASIC6.69□□□□□ -1.34
RETP07949 AP001437.1-201ENST00000608783 456 ntBASIC6.69□□□□□ -1.34
RETP07949 AL357153.4-201ENST00000620487 1016 ntBASIC6.69□□□□□ -1.34
RETP07949 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RETP07949 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.69□□□□□ -1.34
RETP07949 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 CIR1P2-201ENST00000514821 1342 ntBASIC6.69□□□□□ -1.34
RETP07949 SNX18P3-202ENST00000565670 1750 ntBASIC6.69□□□□□ -1.34
RETP07949 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RETP07949 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.69□□□□□ -1.34
RETP07949 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.69□□□□□ -1.34
RETP07949 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
RETP07949 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.69□□□□□ -1.34
RETP07949 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 AC007938.1-201ENST00000562524 2902 ntBASIC6.68□□□□□ -1.34
RETP07949 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 TPTE2P2-201ENST00000403471 1466 ntBASIC6.68□□□□□ -1.34
RETP07949 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RETP07949 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 COX6B1P3-201ENST00000312310 260 ntBASIC6.68□□□□□ -1.34
RETP07949 RNA5SP172-201ENST00000365061 118 ntBASIC6.68□□□□□ -1.34
RETP07949 RN7SKP271-201ENST00000410528 320 ntBASIC6.68□□□□□ -1.34
RETP07949 AL035422.1-201ENST00000414193 397 ntBASIC6.68□□□□□ -1.34
RETP07949 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 CHEK2P5-201ENST00000423877 246 ntBASIC6.68□□□□□ -1.34
RETP07949 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 KATNBL1P2-201ENST00000433311 835 ntBASIC6.68□□□□□ -1.34
RETP07949 CDK7P1-201ENST00000434574 693 ntBASIC6.68□□□□□ -1.34
RETP07949 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 MEF2AP1-201ENST00000454867 863 ntBASIC6.68□□□□□ -1.34
RETP07949 RARRES2P3-201ENST00000457739 473 ntBASIC6.68□□□□□ -1.34
RETP07949 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 RN7SL174P-201ENST00000475578 289 ntBASIC6.68□□□□□ -1.34
RETP07949 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 AC011352.2-201ENST00000514574 1016 ntBASIC6.68□□□□□ -1.34
RETP07949 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
RETP07949 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.68□□□□□ -1.34
RETP07949 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.68□□□□□ -1.34
RETP07949 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.68□□□□□ -1.34
RETP07949 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.68□□□□□ -1.34
RETP07949 AC111186.1-201ENST00000604684 130 ntBASIC6.68□□□□□ -1.34
RETP07949 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.68□□□□□ -1.34
RETP07949 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.68□□□□□ -1.34
RETP07949 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms