Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.16□□□□□ -1.26
TPM3P06753 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM3P06753 AL161931.1-201ENST00000612768 246 ntBASIC7.16□□□□□ -1.26
TPM3P06753 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM3P06753 AC000095.2-202ENST00000637415 154 ntBASIC7.16□□□□□ -1.26
TPM3P06753 AC119674.1-217ENST00000641942 1086 ntBASIC7.16□□□□□ -1.26
TPM3P06753 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM3P06753 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM3P06753 AC114876.1-201ENST00000490962 1366 ntBASIC7.16□□□□□ -1.26
TPM3P06753 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TPM3P06753 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
TPM3P06753 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM3P06753 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM3P06753 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM3P06753 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM3P06753 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 AC123769.1-201ENST00000530992 3192 ntBASIC7.15□□□□□ -1.26
TPM3P06753 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.15□□□□□ -1.26
TPM3P06753 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TPM3P06753 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TPM3P06753 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.15□□□□□ -1.26
TPM3P06753 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 RN7SKP151-201ENST00000410230 316 ntBASIC7.15□□□□□ -1.26
TPM3P06753 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM3P06753 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM3P06753 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TPM3P06753 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM3P06753 AC093719.1-201ENST00000480427 441 ntBASIC7.15□□□□□ -1.26
TPM3P06753 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM3P06753 IGKV1D-22-201ENST00000518953 324 ntBASIC7.15□□□□□ -1.26
TPM3P06753 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 AP000619.2-201ENST00000546014 969 ntBASIC7.15□□□□□ -1.26
TPM3P06753 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 AL132640.2-202ENST00000559732 614 ntBASIC7.15□□□□□ -1.26
TPM3P06753 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM3P06753 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 AL021368.3-201ENST00000607119 578 ntBASIC7.15□□□□□ -1.26
TPM3P06753 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM3P06753 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
TPM3P06753 KYNUP3-201ENST00000574386 1341 ntBASIC7.15□□□□□ -1.26
TPM3P06753 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
TPM3P06753 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TPM3P06753 AL049634.1-201ENST00000453770 1720 ntBASIC7.15□□□□□ -1.27
TPM3P06753 AC140134.1-201ENST00000511830 3544 ntBASIC7.15□□□□□ -1.27
TPM3P06753 AC015799.1-201ENST00000622996 3122 ntBASIC7.14□□□□□ -1.27
TPM3P06753 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
TPM3P06753 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 RNA5SP301-201ENST00000362537 121 ntBASIC7.14□□□□□ -1.27
TPM3P06753 SNORD1C-201ENST00000363315 78 ntBASIC7.14□□□□□ -1.27
TPM3P06753 RNA5SP176-201ENST00000390956 110 ntBASIC7.14□□□□□ -1.27
TPM3P06753 PDCL3P5-201ENST00000398028 722 ntBASIC7.14□□□□□ -1.27
TPM3P06753 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM3P06753 U3.43-201ENST00000410734 213 ntBASIC7.14□□□□□ -1.27
TPM3P06753 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 GYG1P2-201ENST00000426437 1006 ntBASIC7.14□□□□□ -1.27
TPM3P06753 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.14□□□□□ -1.27
TPM3P06753 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM3P06753 RN7SL91P-201ENST00000469313 291 ntBASIC7.14□□□□□ -1.27
TPM3P06753 AC018475.1-201ENST00000478358 465 ntBASIC7.14□□□□□ -1.27
TPM3P06753 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM3P06753 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.14□□□□□ -1.27
TPM3P06753 AC008429.2-201ENST00000523057 864 ntBASIC7.14□□□□□ -1.27
TPM3P06753 OR4C1P-201ENST00000530880 937 ntBASIC7.14□□□□□ -1.27
TPM3P06753 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TPM3P06753 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM3P06753 RPL12P48-201ENST00000605620 304 ntBASIC7.14□□□□□ -1.27
TPM3P06753 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM3P06753 AC093635.1-201ENST00000609028 555 ntBASIC7.14□□□□□ -1.27
TPM3P06753 AC006600.2-201ENST00000624834 2506 ntBASIC7.14□□□□□ -1.27
TPM3P06753 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
TPM3P06753 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM3P06753 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM3P06753 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM3P06753 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM3P06753 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM3P06753 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM3P06753 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms