Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC009120.2-204ENST00000621548 2032 ntBASIC7.71□□□□□ -1.17
CLIP2Q9UDT6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CLIP2Q9UDT6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.71□□□□□ -1.17
CLIP2Q9UDT6 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC007383.1-201ENST00000445875 636 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC019084.1-201ENST00000457337 432 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC117500.1-201ENST00000497352 755 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 OR52K3P-201ENST00000531655 943 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AL445647.2-201ENST00000615170 130 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 U1.41-201ENST00000617626 165 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 AC023245.2-201ENST00000530760 2978 ntBASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP2Q9UDT6 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC009135.2-201ENST00000624136 1768 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RNA5SP77-201ENST00000365394 120 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 OOSP1-201ENST00000398992 1270 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC017035.1-201ENST00000411999 1115 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL359092.1-201ENST00000417156 265 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL360013.1-201ENST00000419031 858 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL451136.1-201ENST00000435399 325 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 TIMM8BP2-201ENST00000445940 251 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RN7SL39P-201ENST00000462264 297 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 OR9A1P-202ENST00000484361 945 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RPL5P14-201ENST00000494197 878 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC018645.1-201ENST00000505003 109 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 HMGN1P16-201ENST00000508308 283 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 SCARNA5-201ENST00000516201 276 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RNA5SP473-201ENST00000516402 125 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC135983.3-201ENST00000528049 1226 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL162632.2-201ENST00000553933 399 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RN7SL208P-201ENST00000577964 296 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 OR1N1-202ENST00000619659 939 ntBASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP2Q9UDT6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms