Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP003084.1-201ENST00000524828 742 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AP001372.4-201ENST00000524889 472 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 NDUFA3P2-201ENST00000531434 232 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC079866.1-201ENST00000534985 1220 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 OR7E19P-202ENST00000589942 844 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 MTATP6P2-201ENST00000603319 678 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL359704.2-201ENST00000604335 521 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC135178.6-201ENST00000605314 398 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL450270.1-201ENST00000606160 391 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL356118.1-201ENST00000635272 1078 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AP001157.1-201ENST00000550837 2339 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 DDX6P1-205ENST00000441966 1436 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC025809.2-201ENST00000625085 1802 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 TMEM75-201ENST00000624314 2165 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 RNA5SP302-201ENST00000364896 100 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 U3.14-201ENST00000365363 227 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 RPS3AP5-201ENST00000389400 821 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 MRPL32P1-201ENST00000406301 247 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 RNU6-584P-201ENST00000410350 95 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 RPSAP60-201ENST00000415403 880 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ANXA2P2-201ENST00000435128 1020 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 CLIC4P1-201ENST00000453177 535 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC078857.1-201ENST00000469870 667 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 RN7SL741P-201ENST00000482473 289 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 OR9A1P-202ENST00000484361 945 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC079594.1-201ENST00000489757 331 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 OR9N1P-201ENST00000491296 333 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 TECRP2-201ENST00000503270 928 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC112198.4-201ENST00000515450 351 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 OR4C1P-201ENST00000530880 937 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 HMGN1P26-201ENST00000558737 303 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 FCGR1CP-201ENST00000579737 1127 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC011497.2-201ENST00000600255 639 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL355802.4-201ENST00000607635 548 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC012510.1-201ENST00000607946 759 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 OR7M1P-201ENST00000608946 533 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC005156.1-201ENST00000613371 573 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AL163051.2-201ENST00000618976 735 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC125232.1-201ENST00000452554 1408 ntBASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AMBRA1Q9C0C7 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms