Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AL669831.5-218ENST00000591702 1873 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ZNF969P-201ENST00000510345 2341 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ABCA11P-202ENST00000504019 2110 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC009120.2-204ENST00000621548 2032 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 RNA5SP346-201ENST00000363541 121 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 SNORA51.9-201ENST00000384295 124 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC004386.1-201ENST00000393214 761 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AL157884.1-201ENST00000424561 454 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 OR52I1-201ENST00000450052 1050 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 RBBP4P1-201ENST00000502424 1276 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AL158068.1-201ENST00000506116 616 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 OR4D12P-201ENST00000509361 911 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC095052.1-201ENST00000509955 863 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 NANOGNBP2-201ENST00000544753 553 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC092375.1-201ENST00000550410 637 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC108865.2-201ENST00000606881 432 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 MIR6729-201ENST00000618194 65 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC105114.1-201ENST00000624795 1862 ntBASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM1Q2M3G4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC092111.1-201ENST00000618256 3358 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AL136984.1-201ENST00000607611 1893 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 COX6B1P3-201ENST00000312310 260 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AL139805.1-201ENST00000407837 289 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC066692.1-201ENST00000421721 457 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 IPPKP1-201ENST00000422501 768 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 PMS2P9-201ENST00000441237 515 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AL645936.1-201ENST00000441979 518 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AP002453.1-201ENST00000492327 668 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 NPM1P27-201ENST00000502784 830 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC090568.1-201ENST00000509499 856 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC108103.1-201ENST00000511286 446 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 COX6B1P4-201ENST00000519826 484 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC005332.4-201ENST00000592752 579 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AL138895.2-201ENST00000603019 178 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AP001437.1-201ENST00000608783 456 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC022106.1-201ENST00000612834 766 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC091305.2-201ENST00000624049 1576 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC027575.3-201ENST00000583058 2747 ntBASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM1Q2M3G4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms