Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RN7SL143P-201ENST00000496780 297 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 SUMO2P19-201ENST00000518920 295 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 AC023158.1-201ENST00000561632 1025 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 MTATP6P2-201ENST00000603319 678 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC091193.1-201ENST00000604640 448 ntBASIC5.89□□□□□ -1.47
SOX2P48431 KATNBL1P5-201ENST00000605015 517 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC135178.6-201ENST00000605314 398 ntBASIC5.89□□□□□ -1.47
SOX2P48431 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AC010320.5-201ENST00000619124 676 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AP000943.4-201ENST00000622912 357 ntBASIC5.89□□□□□ -1.47
SOX2P48431 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AL356585.10-201ENST00000641883 123 ntBASIC5.89□□□□□ -1.47
SOX2P48431 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SOX2P48431 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 ATP5BP1-201ENST00000411980 1574 ntBASIC5.89□□□□□ -1.47
SOX2P48431 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 MTCO1P25-201ENST00000414449 1799 ntBASIC5.88□□□□□ -1.47
SOX2P48431 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SOX2P48431 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 AC105749.1-201ENST00000631338 2008 ntBASIC5.88□□□□□ -1.47
SOX2P48431 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SOX2P48431 FAM32BP-201ENST00000344033 333 ntBASIC5.88□□□□□ -1.47
SOX2P48431 RNU6-609P-201ENST00000365459 107 ntBASIC5.88□□□□□ -1.47
SOX2P48431 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SOX2P48431 VN1R37P-201ENST00000419096 748 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 CYP4F34P-201ENST00000425951 481 ntBASIC5.88□□□□□ -1.47
SOX2P48431 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC239367.3-201ENST00000428996 814 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 SNX18P9-201ENST00000440580 835 ntBASIC5.88□□□□□ -1.47
SOX2P48431 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 PRELID1P3-201ENST00000450055 643 ntBASIC5.88□□□□□ -1.47
SOX2P48431 MEF2AP1-201ENST00000454867 863 ntBASIC5.88□□□□□ -1.47
SOX2P48431 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 AC078857.1-201ENST00000469870 667 ntBASIC5.88□□□□□ -1.47
SOX2P48431 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.88□□□□□ -1.47
SOX2P48431 HAUS1P1-201ENST00000505275 832 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC010468.3-201ENST00000508225 458 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 SEC11B-201ENST00000518383 499 ntBASIC5.88□□□□□ -1.47
SOX2P48431 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 IGHV3-57-201ENST00000520143 280 ntBASIC5.88□□□□□ -1.47
SOX2P48431 VTA1P2-201ENST00000520205 911 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 AP001803.1-201ENST00000525668 147 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.88□□□□□ -1.47
SOX2P48431 AP002383.5-201ENST00000542623 1161 ntBASIC5.88□□□□□ -1.47
SOX2P48431 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 AL109628.1-201ENST00000556877 366 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC026458.1-201ENST00000564330 438 ntBASIC5.88□□□□□ -1.47
SOX2P48431 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 AC133794.1-201ENST00000602731 914 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC005070.2-201ENST00000604391 260 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC097467.4-201ENST00000605504 141 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AL031777.2-201ENST00000611953 196 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms