Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC027667.1-201ENST00000545814 304 ntBASIC6.71□□□□□ -1.34
RETP07949 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.71□□□□□ -1.34
RETP07949 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.71□□□□□ -1.34
RETP07949 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.71□□□□□ -1.34
RETP07949 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.71□□□□□ -1.34
RETP07949 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.71□□□□□ -1.34
RETP07949 AC004232.2-201ENST00000574245 821 ntBASIC6.71□□□□□ -1.34
RETP07949 AC008521.2-201ENST00000591021 259 ntBASIC6.71□□□□□ -1.34
RETP07949 AC020914.7-201ENST00000594477 545 ntBASIC6.71□□□□□ -1.34
RETP07949 CYCSP1-201ENST00000604815 315 ntBASIC6.71□□□□□ -1.34
RETP07949 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.71□□□□□ -1.34
RETP07949 AL352984.2-201ENST00000611153 546 ntBASIC6.71□□□□□ -1.34
RETP07949 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.71□□□□□ -1.34
RETP07949 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.71□□□□□ -1.34
RETP07949 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
RETP07949 PABPC1P8-201ENST00000452851 2086 ntBASIC6.71□□□□□ -1.34
RETP07949 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.71□□□□□ -1.34
RETP07949 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RETP07949 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.71□□□□□ -1.34
RETP07949 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.71□□□□□ -1.34
RETP07949 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RETP07949 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.7□□□□□ -1.34
RETP07949 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RETP07949 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 CDY10P-201ENST00000452415 1567 ntBASIC6.7□□□□□ -1.34
RETP07949 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
RETP07949 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RETP07949 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 AC023490.2-201ENST00000359859 470 ntBASIC6.7□□□□□ -1.34
RETP07949 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RETP07949 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 AC092865.3-201ENST00000425390 1026 ntBASIC6.7□□□□□ -1.34
RETP07949 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 LDHAP2-201ENST00000437325 985 ntBASIC6.7□□□□□ -1.34
RETP07949 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 PFN1P11-201ENST00000445829 389 ntBASIC6.7□□□□□ -1.34
RETP07949 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 AC140063.1-201ENST00000541343 259 ntBASIC6.7□□□□□ -1.34
RETP07949 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 AC016144.1-201ENST00000548175 1087 ntBASIC6.7□□□□□ -1.34
RETP07949 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RETP07949 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.7□□□□□ -1.34
RETP07949 AC093524.1-201ENST00000564266 1094 ntBASIC6.7□□□□□ -1.34
RETP07949 AC092718.4-201ENST00000566639 716 ntBASIC6.7□□□□□ -1.34
RETP07949 MIR5095-201ENST00000578844 88 ntBASIC6.7□□□□□ -1.34
RETP07949 AC015818.6-201ENST00000584274 634 ntBASIC6.7□□□□□ -1.34
RETP07949 AL589863.1-201ENST00000595383 631 ntBASIC6.7□□□□□ -1.34
RETP07949 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 AC004908.1-201ENST00000606572 541 ntBASIC6.7□□□□□ -1.34
RETP07949 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.7□□□□□ -1.34
RETP07949 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.7□□□□□ -1.34
RETP07949 AC004943.1-203ENST00000624370 1074 ntBASIC6.7□□□□□ -1.34
RETP07949 AC079949.2-201ENST00000617117 2933 ntBASIC6.7□□□□□ -1.34
RETP07949 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
RETP07949 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
RETP07949 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.7□□□□□ -1.34
RETP07949 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
RETP07949 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.7□□□□□ -1.34
RETP07949 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RETP07949 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RETP07949 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RETP07949 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.69□□□□□ -1.34
RETP07949 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 DDX43P1-201ENST00000510713 1763 ntBASIC6.69□□□□□ -1.34
RETP07949 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RETP07949 CLCA3P-203ENST00000490028 2781 ntBASIC6.69□□□□□ -1.34
RETP07949 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RETP07949 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RETP07949 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms