Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 RN7SKP5-201ENST00000517045 272 ntBASIC6.02□□□□□ -1.45
SSX4O60224 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.02□□□□□ -1.45
SSX4O60224 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX4O60224 AC092375.1-201ENST00000550410 637 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX4O60224 AC026458.1-201ENST00000564330 438 ntBASIC6.02□□□□□ -1.45
SSX4O60224 EEF1B2P1-201ENST00000567221 672 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 AC036176.3-201ENST00000602456 418 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC019257.2-201ENST00000605539 497 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC063962.1-201ENST00000608199 521 ntBASIC6.02□□□□□ -1.45
SSX4O60224 MIR6885-201ENST00000612241 66 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AL445647.2-201ENST00000615170 130 ntBASIC6.02□□□□□ -1.45
SSX4O60224 AC004836.1-201ENST00000623032 634 ntBASIC6.02□□□□□ -1.45
SSX4O60224 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX4O60224 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX4O60224 AC139426.3-201ENST00000605648 2059 ntBASIC6.02□□□□□ -1.45
SSX4O60224 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX4O60224 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SSX4O60224 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 AC005332.9-201ENST00000620266 2921 ntBASIC6.01□□□□□ -1.45
SSX4O60224 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.01□□□□□ -1.45
SSX4O60224 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX4O60224 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX4O60224 AP003170.5-201ENST00000397185 335 ntBASIC6.01□□□□□ -1.45
SSX4O60224 RN7SKP38-201ENST00000410782 309 ntBASIC6.01□□□□□ -1.45
SSX4O60224 RNA5SP115-201ENST00000411160 107 ntBASIC6.01□□□□□ -1.45
SSX4O60224 RNU2-18P-201ENST00000411224 162 ntBASIC6.01□□□□□ -1.45
SSX4O60224 AC013268.2-201ENST00000420753 337 ntBASIC6.01□□□□□ -1.45
SSX4O60224 AC006509.1-201ENST00000420788 634 ntBASIC6.01□□□□□ -1.45
SSX4O60224 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 AP003385.1-201ENST00000426387 893 ntBASIC6.01□□□□□ -1.45
SSX4O60224 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SSX4O60224 AC083855.1-201ENST00000440041 258 ntBASIC6.01□□□□□ -1.45
SSX4O60224 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 RN7SL492P-201ENST00000460700 295 ntBASIC6.01□□□□□ -1.45
SSX4O60224 RN7SL836P-201ENST00000476140 296 ntBASIC6.01□□□□□ -1.45
SSX4O60224 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX4O60224 HNRNPRP2-201ENST00000528421 743 ntBASIC6.01□□□□□ -1.45
SSX4O60224 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX4O60224 OR5M6P-201ENST00000530227 937 ntBASIC6.01□□□□□ -1.45
SSX4O60224 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX4O60224 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 MIR378C-201ENST00000578683 81 ntBASIC6.01□□□□□ -1.45
SSX4O60224 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 AC111186.1-201ENST00000604684 130 ntBASIC6.01□□□□□ -1.45
SSX4O60224 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX4O60224 AF117829.2-201ENST00000619538 361 ntBASIC6.01□□□□□ -1.45
SSX4O60224 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 AC073263.3-201ENST00000624449 858 ntBASIC6.01□□□□□ -1.45
SSX4O60224 CLUHP10-201ENST00000631979 980 ntBASIC6.01□□□□□ -1.45
SSX4O60224 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX4O60224 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX4O60224 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX4O60224 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX4O60224 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 STAG3L4-201ENST00000352103 530 ntBASIC6□□□□□ -1.45
SSX4O60224 RPL12P1-201ENST00000374520 498 ntBASIC6□□□□□ -1.45
SSX4O60224 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms