Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 VTI1BP4-201ENST00000427516 527 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 RPL12P16-201ENST00000431098 498 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC079922.1-201ENST00000443291 359 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AL390198.2-201ENST00000510553 222 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SNORA70.11-201ENST00000515987 138 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SNORA70.13-201ENST00000516116 138 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 MIR1273F-201ENST00000580581 99 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC006328.2-201ENST00000623198 397 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC012005.2-201ENST00000624333 397 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 FKBP1AP4-201ENST00000631775 336 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC022726.2-201ENST00000634673 547 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC119674.1-217ENST00000641942 1086 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC092692.1-201ENST00000623625 2595 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 BIN2P1-201ENST00000504996 1530 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 GTF2IP4-201ENST00000453092 2054 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 SEPT7P2-202ENST00000398921 823 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 PEX12P1-201ENST00000400284 1048 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RN7SKP268-201ENST00000411107 316 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 SNRPBP1-201ENST00000443634 282 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 OR7E7P-201ENST00000455678 1012 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL492P-201ENST00000460700 295 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL221P-201ENST00000466190 281 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC026782.2-201ENST00000510845 636 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL689P-201ENST00000577215 297 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 MIR4262-201ENST00000578394 54 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 PRR13P3-201ENST00000603578 376 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AL161931.1-201ENST00000612768 246 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AP000473.2-201ENST00000602659 1537 ntBASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC28BQ9BUN5 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 AC092451.3-201ENST00000625067 1343 ntBASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC28BQ9BUN5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms