Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC121334.1-201ENST00000396414 802 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 NPM1P10-201ENST00000398310 865 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 MIR1266-201ENST00000408125 84 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 VN1R3-201ENST00000418822 919 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 AL022324.2-201ENST00000434827 780 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 AC092106.2-201ENST00000436597 487 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 AP003385.3-201ENST00000472498 287 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 H3F3AP3-201ENST00000497682 407 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC023818.1-201ENST00000498379 384 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC093870.1-201ENST00000506837 213 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC084337.1-201ENST00000524809 686 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC084851.2-201ENST00000530377 364 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC027796.1-201ENST00000575593 512 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.82□□□□□ -1.32
PTPN9P43378 OR7A8P-201ENST00000595427 913 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 AC010615.3-201ENST00000597319 394 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.82□□□□□ -1.32
PTPN9P43378 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.82□□□□□ -1.32
PTPN9P43378 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.82□□□□□ -1.32
PTPN9P43378 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.82□□□□□ -1.32
PTPN9P43378 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PTPN9P43378 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.82□□□□□ -1.32
PTPN9P43378 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.82□□□□□ -1.32
PTPN9P43378 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 AC023245.2-201ENST00000530760 2978 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PTPN9P43378 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN9P43378 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 AL391261.1-201ENST00000555712 1479 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN9P43378 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 FAM32BP-201ENST00000344033 333 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PTPN9P43378 SNORA7A-201ENST00000384765 139 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 AC244453.4-201ENST00000419150 388 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 AL354893.1-201ENST00000433735 348 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN9P43378 RSL24D1P2-201ENST00000445584 366 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 AL020997.1-201ENST00000446554 349 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN9P43378 RPSAP24-201ENST00000461543 873 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN9P43378 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN9P43378 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN9P43378 AC092718.4-201ENST00000566639 716 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN9P43378 AL078623.1-201ENST00000602702 907 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 AC004805.3-201ENST00000603178 310 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN9P43378 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN9P43378 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PTPN9P43378 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
PTPN9P43378 AC005618.1-201ENST00000606901 3148 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 AC010168.2-201ENST00000562691 5428 ntBASIC6.81□□□□□ -1.32
PTPN9P43378 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN9P43378 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 OFD1P17-201ENST00000437639 3018 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 RNA5SP350-201ENST00000363298 111 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PTPN9P43378 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 RNA5SP155-201ENST00000411154 129 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.8□□□□□ -1.32
PTPN9P43378 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms