Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 OSTCP1-201ENST00000455507 450 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 WBP1LP1-201ENST00000460451 896 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 RN7SL91P-201ENST00000469313 291 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 RN7SL445P-201ENST00000495609 293 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 RN7SL516P-201ENST00000496127 297 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 EIF3KP1-201ENST00000513279 656 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC026458.1-201ENST00000564330 438 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 EIF4A3P1-201ENST00000578499 647 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 RN7SL786P-201ENST00000579130 298 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC006120.1-201ENST00000579375 546 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AL109936.2-201ENST00000605350 650 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC104117.5-201ENST00000606195 547 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC005277.2-201ENST00000617898 390 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 MRPL57P1-201ENST00000621486 265 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC016542.3-201ENST00000623520 619 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 DLEU2L-201ENST00000371086 3555 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AL078595.2-201ENST00000605309 1780 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 AC138907.8-201ENST00000623981 2256 ntBASIC5.06□□□□□ -1.6
RBFOX3A6NFN3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 PPBPP2-201ENST00000513150 1362 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 HNRNPCP2-201ENST00000399515 881 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 U3.43-201ENST00000410734 213 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 IFNA12P-201ENST00000413147 571 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 PPIAP30-201ENST00000415473 519 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 VDAC1P10-201ENST00000416715 891 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC109638.1-201ENST00000417406 326 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 GAPDHP57-201ENST00000424400 585 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 MTND1P10-201ENST00000426108 832 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 VTI1BP4-201ENST00000427516 527 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC018804.1-201ENST00000430381 618 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 RPSAP62-201ENST00000432596 833 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC017007.1-201ENST00000511960 415 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 GTF2IP11-201ENST00000526931 420 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 OR5M6P-201ENST00000530227 937 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 OR4F28P-201ENST00000559128 938 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 MIR5705-201ENST00000579870 89 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 MIR4258-201ENST00000580920 91 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 OR4F8P-201ENST00000589943 937 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AL049840.5-201ENST00000602827 552 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC116165.3-201ENST00000614524 400 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 RN7SL126P-201ENST00000616400 299 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 AC119674.1-209ENST00000642031 997 ntBASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms