Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 SLC25A51P2-201ENST00000535708 889 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC089984.3-201ENST00000552838 363 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL360012.1-201ENST00000602813 131 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL953862.2-201ENST00000603089 820 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 U1.25-201ENST00000614085 162 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 U1.34-201ENST00000618578 162 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 U1.31-201ENST00000620022 160 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 MIR7854-201ENST00000620068 65 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC127071.2-201ENST00000623293 527 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL035425.4-201ENST00000624509 1063 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 NCOA4P2-201ENST00000340589 1813 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC009120.2-204ENST00000621548 2032 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC009220.2-201ENST00000489759 1751 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 FAM32BP-201ENST00000344033 333 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SKP191-201ENST00000364713 306 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RNA5SP442-201ENST00000365050 107 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RNA5SP355-201ENST00000365317 135 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AL359694.1-201ENST00000403247 604 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF37CP-201ENST00000406795 241 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 Z68868.1-201ENST00000429048 544 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 BMS1P11-201ENST00000442351 885 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC133965.1-201ENST00000452984 354 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RPL36AP55-201ENST00000454114 305 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 BMS1P9-201ENST00000457640 885 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SL372P-201ENST00000461982 298 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SNORA58-201ENST00000505219 137 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC137549.1-201ENST00000514243 533 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SCARNA11.1-201ENST00000516918 132 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 IGHV3-57-201ENST00000520143 280 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 PHBP2-201ENST00000532859 806 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC007068.2-201ENST00000543168 395 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC093524.1-201ENST00000564266 1094 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC100832.2-201ENST00000582080 776 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC091133.5-201ENST00000603088 301 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 RPS4XP21-201ENST00000603814 750 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC025171.4-201ENST00000607250 1047 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC005393.1-201ENST00000617916 584 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC012653.2-201ENST00000621880 420 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms