Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 CDY11P-201ENST00000447168 1651 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC062022.1-201ENST00000451026 1684 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL355377.1-201ENST00000621125 1653 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 UBBP1-201ENST00000392399 473 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL359694.1-201ENST00000403247 604 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL049697.3-201ENST00000406493 982 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 RNU4-64P-201ENST00000410795 131 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 RNA5SP115-201ENST00000411160 107 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 RN7SKP296-201ENST00000411185 341 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC000089.1-201ENST00000424559 801 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC009303.1-201ENST00000426307 352 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 NPM1P27-201ENST00000502784 830 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL121579.2-201ENST00000555466 590 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC091304.4-201ENST00000565703 620 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 TCL6_3.1-201ENST00000619064 137 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC095038.1-201ENST00000429248 1591 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC074141.1-201ENST00000588129 2995 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AL079341.1-201ENST00000404701 1207 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AL139100.1-201ENST00000408001 498 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 RPL18AP14-201ENST00000417685 526 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 SNRPBP1-201ENST00000443634 282 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC096661.1-201ENST00000515870 822 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC084337.1-201ENST00000524809 686 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 MIR4312-201ENST00000579909 76 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 MIR378H-201ENST00000579966 83 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 RN7SL657P-201ENST00000582431 293 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AL078623.1-201ENST00000602702 907 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 RPL12P48-201ENST00000605620 304 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 MIR8082-201ENST00000612488 81 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC018692.2-201ENST00000624130 348 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC018659.2-201ENST00000624690 715 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms