Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC010463.3-201ENST00000594077 500 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AL049840.6-201ENST00000604583 345 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 AC093875.1-201ENST00000623688 504 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 FKBP1AP4-201ENST00000631775 336 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.29□□□□□ -1.4
CLRN1P58418 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.29□□□□□ -1.4
CLRN1P58418 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLRN1P58418 AL033543.1-201ENST00000623440 13454 ntBASIC6.29□□□□□ -1.4
CLRN1P58418 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 AL356361.1-201ENST00000400943 1459 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC090114.1-201ENST00000393266 448 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 RN7SKP39-201ENST00000410773 322 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 OR52N3P-201ENST00000413417 934 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 AL365338.1-201ENST00000422282 858 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 DUTP4-201ENST00000424782 475 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC092648.1-201ENST00000425870 423 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 CYP4F34P-201ENST00000425951 481 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 SUMO2P8-201ENST00000434672 286 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 RAB9AP5-201ENST00000437794 597 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC245517.2-201ENST00000442890 346 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 RAB9AP2-201ENST00000443911 597 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 RPL6P24-201ENST00000445338 864 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 Z83846.1-201ENST00000446798 265 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 HMGB1P26-201ENST00000452520 628 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 SNORA35.1-201ENST00000458908 128 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 OR5H3P-201ENST00000502817 919 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLRN1P58418 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 NACAP6-201ENST00000509572 622 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 OR7E154P-201ENST00000525174 932 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 OR5M4P-201ENST00000529436 925 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC090971.3-201ENST00000557871 1041 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC024614.1-201ENST00000577546 307 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC096708.2-201ENST00000577676 512 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 AL022067.1-201ENST00000602426 454 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 QTRT1P1-201ENST00000604344 1078 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC113361.1-201ENST00000606683 543 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC012640.3-201ENST00000607847 430 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC063962.1-201ENST00000608199 521 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC021851.1-201ENST00000608537 1082 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 AC143336.1-201ENST00000614164 836 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 OR10AB1P-202ENST00000641219 1686 ntBASIC6.28□□□□□ -1.4
CLRN1P58418 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 AC092111.1-201ENST00000618256 3358 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms