Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CDH13P55290 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH13P55290 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.37□□□□□ -1.39
CDH13P55290 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CDH13P55290 LINC01616-201ENST00000561816 2280 ntBASIC6.37□□□□□ -1.39
CDH13P55290 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH13P55290 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH13P55290 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH13P55290 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.36□□□□□ -1.39
CDH13P55290 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 AC079753.1-201ENST00000623243 3868 ntBASIC6.36□□□□□ -1.39
CDH13P55290 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.36□□□□□ -1.39
CDH13P55290 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 AL451061.1-201ENST00000407887 862 ntBASIC6.36□□□□□ -1.39
CDH13P55290 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDH13P55290 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH13P55290 NFU1P1-201ENST00000413128 774 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH13P55290 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH13P55290 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 CYCSP52-201ENST00000422857 310 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 AL592114.2-201ENST00000440142 532 ntBASIC6.36□□□□□ -1.39
CDH13P55290 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AC099340.1-201ENST00000475247 599 ntBASIC6.36□□□□□ -1.39
CDH13P55290 RPL17P2-201ENST00000491913 451 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 AC008429.2-201ENST00000523057 864 ntBASIC6.36□□□□□ -1.39
CDH13P55290 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 HNRNPCP8-201ENST00000528764 888 ntBASIC6.36□□□□□ -1.39
CDH13P55290 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH13P55290 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 RN7SL689P-201ENST00000577215 297 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AC091133.5-201ENST00000603088 301 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH13P55290 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 MIR6736-201ENST00000616799 59 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AP003789.1-201ENST00000617737 605 ntBASIC6.36□□□□□ -1.39
CDH13P55290 AL035425.4-201ENST00000624509 1063 ntBASIC6.36□□□□□ -1.39
CDH13P55290 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH13P55290 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDH13P55290 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 AC006511.3-201ENST00000624929 1783 ntBASIC6.36□□□□□ -1.39
CDH13P55290 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH13P55290 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH13P55290 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH13P55290 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH13P55290 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH13P55290 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH13P55290 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH13P55290 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CDH13P55290 AC034229.2-201ENST00000566945 2508 ntBASIC6.35□□□□□ -1.39
CDH13P55290 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 PSMC1P4-201ENST00000515236 1327 ntBASIC6.35□□□□□ -1.39
CDH13P55290 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDH13P55290 RNA5SP302-201ENST00000364896 100 ntBASIC6.35□□□□□ -1.39
CDH13P55290 RNA5SP35-201ENST00000391257 129 ntBASIC6.35□□□□□ -1.39
CDH13P55290 RN7SKP91-201ENST00000410852 288 ntBASIC6.35□□□□□ -1.39
CDH13P55290 RNA5SP115-201ENST00000411160 107 ntBASIC6.35□□□□□ -1.39
CDH13P55290 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH13P55290 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 GAPDHP33-201ENST00000443168 1013 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH13P55290 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH13P55290 RN7SL37P-201ENST00000490461 307 ntBASIC6.35□□□□□ -1.39
CDH13P55290 RPL5P14-201ENST00000494197 878 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.35□□□□□ -1.39
CDH13P55290 AC105391.1-201ENST00000503155 1045 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 AC093878.1-201ENST00000515630 432 ntBASIC6.35□□□□□ -1.39
CDH13P55290 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 AL121579.2-201ENST00000555466 590 ntBASIC6.35□□□□□ -1.39
CDH13P55290 MIR4312-201ENST00000579909 76 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH13P55290 AC010615.3-201ENST00000597319 394 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH13P55290 AC245052.7-201ENST00000601161 359 ntBASIC6.35□□□□□ -1.39
CDH13P55290 DIMT1P1-201ENST00000603970 763 ntBASIC6.35□□□□□ -1.39
CDH13P55290 AL353807.4-201ENST00000604995 257 ntBASIC6.35□□□□□ -1.39
CDH13P55290 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms