Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.53□□□□□ -1.52
CDX1P47902 SNRPEP5-201ENST00000425442 278 ntBASIC5.53□□□□□ -1.52
CDX1P47902 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 RPS10P14-201ENST00000440748 502 ntBASIC5.53□□□□□ -1.52
CDX1P47902 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 SLAMF6P1-201ENST00000451067 602 ntBASIC5.53□□□□□ -1.52
CDX1P47902 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 RN7SL849P-201ENST00000485236 295 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AP005202.1-201ENST00000489915 867 ntBASIC5.53□□□□□ -1.52
CDX1P47902 RN7SL518P-201ENST00000491887 280 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AL135933.1-201ENST00000498657 802 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 AC120036.3-201ENST00000517826 292 ntBASIC5.53□□□□□ -1.52
CDX1P47902 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.53□□□□□ -1.52
CDX1P47902 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 RBMS2P1-201ENST00000525031 1226 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AC079866.1-201ENST00000534985 1220 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AC090115.2-201ENST00000548060 883 ntBASIC5.53□□□□□ -1.52
CDX1P47902 FXNP1-201ENST00000555153 337 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.53□□□□□ -1.52
CDX1P47902 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.53□□□□□ -1.52
CDX1P47902 MIR378H-201ENST00000579966 83 ntBASIC5.53□□□□□ -1.52
CDX1P47902 OR7E19P-202ENST00000589942 844 ntBASIC5.53□□□□□ -1.52
CDX1P47902 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.53□□□□□ -1.52
CDX1P47902 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.53□□□□□ -1.52
CDX1P47902 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDX1P47902 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDX1P47902 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CDX1P47902 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 AC027279.4-201ENST00000624371 2072 ntBASIC5.52□□□□□ -1.53
CDX1P47902 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AC012078.1-201ENST00000405035 1646 ntBASIC5.52□□□□□ -1.53
CDX1P47902 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 AL356361.1-201ENST00000400943 1459 ntBASIC5.52□□□□□ -1.53
CDX1P47902 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 AC015799.1-201ENST00000622996 3122 ntBASIC5.52□□□□□ -1.53
CDX1P47902 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 MIR541-201ENST00000401360 84 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AL451061.1-201ENST00000407887 862 ntBASIC5.52□□□□□ -1.53
CDX1P47902 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 RN7SKP268-201ENST00000411107 316 ntBASIC5.52□□□□□ -1.53
CDX1P47902 RNA5SP280-201ENST00000411230 115 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 FTLP17-201ENST00000432567 525 ntBASIC5.52□□□□□ -1.53
CDX1P47902 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 AC005517.1-201ENST00000452091 489 ntBASIC5.52□□□□□ -1.53
CDX1P47902 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 C1DP3-201ENST00000455013 423 ntBASIC5.52□□□□□ -1.53
CDX1P47902 RBMY2EP-202ENST00000456360 940 ntBASIC5.52□□□□□ -1.53
CDX1P47902 SNORA81.1-201ENST00000458922 177 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AL079303.1-201ENST00000486611 463 ntBASIC5.52□□□□□ -1.53
CDX1P47902 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.52□□□□□ -1.53
CDX1P47902 AC130366.1-201ENST00000526505 1192 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.52□□□□□ -1.53
CDX1P47902 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 MIR3135A-201ENST00000578460 77 ntBASIC5.52□□□□□ -1.53
CDX1P47902 RN7SL426P-201ENST00000579106 295 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 SIGLEC31P-201ENST00000594237 551 ntBASIC5.52□□□□□ -1.53
CDX1P47902 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.52□□□□□ -1.53
CDX1P47902 AL049541.2-201ENST00000626377 555 ntBASIC5.52□□□□□ -1.53
CDX1P47902 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDX1P47902 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 TNPO1P2-201ENST00000426249 2665 ntBASIC5.52□□□□□ -1.53
CDX1P47902 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.52□□□□□ -1.53
CDX1P47902 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms