Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SNORD94-201ENST00000386037 137 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AC026310.1-201ENST00000396004 378 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AL033519.1-201ENST00000407266 307 ntBASIC6.53□□□□□ -1.36
CDH3P22223 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH3P22223 AL596268.1-201ENST00000427910 1048 ntBASIC6.53□□□□□ -1.36
CDH3P22223 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CDH3P22223 NPM1P23-201ENST00000440193 849 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH3P22223 AL121578.2-201ENST00000448797 447 ntBASIC6.53□□□□□ -1.36
CDH3P22223 RPS3AP49-201ENST00000472161 790 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AC021220.1-201ENST00000507445 630 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH3P22223 RN7SKP196-201ENST00000516267 345 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH3P22223 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH3P22223 AC084851.2-201ENST00000530377 364 ntBASIC6.53□□□□□ -1.36
CDH3P22223 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH3P22223 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.53□□□□□ -1.36
CDH3P22223 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH3P22223 AC105036.1-201ENST00000566222 271 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.53□□□□□ -1.36
CDH3P22223 AL034374.2-201ENST00000605281 548 ntBASIC6.53□□□□□ -1.36
CDH3P22223 AL138960.1-201ENST00000613838 513 ntBASIC6.53□□□□□ -1.36
CDH3P22223 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 MIR6503-201ENST00000622884 86 ntBASIC6.53□□□□□ -1.36
CDH3P22223 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH3P22223 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH3P22223 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CDH3P22223 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
CDH3P22223 CLCA3P-203ENST00000490028 2781 ntBASIC6.52□□□□□ -1.37
CDH3P22223 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 RNA5SP65-201ENST00000363166 119 ntBASIC6.52□□□□□ -1.37
CDH3P22223 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 AL663061.1-201ENST00000416625 580 ntBASIC6.52□□□□□ -1.37
CDH3P22223 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.52□□□□□ -1.37
CDH3P22223 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.52□□□□□ -1.37
CDH3P22223 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.52□□□□□ -1.37
CDH3P22223 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 RPL17P2-201ENST00000491913 451 ntBASIC6.52□□□□□ -1.37
CDH3P22223 RN7SL143P-201ENST00000496780 297 ntBASIC6.52□□□□□ -1.37
CDH3P22223 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 AC021146.11-201ENST00000503319 491 ntBASIC6.52□□□□□ -1.37
CDH3P22223 AC091849.1-201ENST00000509920 121 ntBASIC6.52□□□□□ -1.37
CDH3P22223 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.52□□□□□ -1.37
CDH3P22223 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 CTSLP2-201ENST00000580501 394 ntBASIC6.52□□□□□ -1.37
CDH3P22223 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
CDH3P22223 AC211486.4-201ENST00000621495 113 ntBASIC6.52□□□□□ -1.37
CDH3P22223 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH3P22223 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CDH3P22223 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.52□□□□□ -1.37
CDH3P22223 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 AC022905.1-201ENST00000503430 3048 ntBASIC6.52□□□□□ -1.37
CDH3P22223 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH3P22223 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
CDH3P22223 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH3P22223 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH3P22223 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH3P22223 OR11H13P-201ENST00000359695 979 ntBASIC6.51□□□□□ -1.37
CDH3P22223 RNU1-5P-201ENST00000362684 144 ntBASIC6.51□□□□□ -1.37
CDH3P22223 FDPSP5-201ENST00000399474 1057 ntBASIC6.51□□□□□ -1.37
CDH3P22223 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms