Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL6A2P12110 AL117339.4-201ENST00000608335 7063 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 AP000547.3-204ENST00000588548 2523 ntBASIC7.04□□□□□ -1.28
COL6A2P12110 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL6A2P12110 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.04□□□□□ -1.28
COL6A2P12110 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
COL6A2P12110 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL6A2P12110 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL6A2P12110 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 MAPK10-344ENST00000641718 3746 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL6A2P12110 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 AC226101.1-201ENST00000401483 387 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 Z86062.1-201ENST00000406773 777 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 RN7SKP271-201ENST00000410528 320 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 RANP4-201ENST00000413361 655 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 RPL23AP18-201ENST00000416139 468 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 ZNF885P-201ENST00000420174 1098 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A2P12110 SOCS5P1-201ENST00000440415 949 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AC079781.1-201ENST00000441505 394 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 ARMC8P1-201ENST00000443069 1289 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 AC044797.1-201ENST00000445744 679 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 Z73417.1-201ENST00000447373 778 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A2P12110 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 LRRC37A14P-201ENST00000452297 462 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 HMGB1P26-201ENST00000452520 628 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AC135721.2-201ENST00000464237 300 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 OR10J9P-201ENST00000511932 987 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC016144.1-201ENST00000548175 1087 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A2P12110 MIR4262-201ENST00000578394 54 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 RN7SL786P-201ENST00000579130 298 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.03□□□□□ -1.28
COL6A2P12110 RPSAP66-201ENST00000592196 606 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 AL022067.1-201ENST00000602426 454 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AL160237.3-201ENST00000604114 1013 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AP001554.1-201ENST00000604533 376 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AL451086.1-201ENST00000605596 223 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AP002802.2-201ENST00000605877 235 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 AL157392.4-201ENST00000609756 345 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.03□□□□□ -1.28
COL6A2P12110 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
COL6A2P12110 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL6A2P12110 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A2P12110 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.02□□□□□ -1.28
COL6A2P12110 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.28
COL6A2P12110 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms