Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL929472.1-201ENST00000417484 429 ntBASIC7.1□□□□□ -1.27
TPM1P09493 OR5W1P-201ENST00000423705 938 ntBASIC7.1□□□□□ -1.27
TPM1P09493 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.1□□□□□ -1.27
TPM1P09493 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 AC079193.1-201ENST00000460497 588 ntBASIC7.1□□□□□ -1.27
TPM1P09493 SLC25A51P1-201ENST00000468432 871 ntBASIC7.1□□□□□ -1.27
TPM1P09493 RPL23AP64-201ENST00000469465 435 ntBASIC7.1□□□□□ -1.27
TPM1P09493 CR383656.1-201ENST00000484916 377 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC022415.1-202ENST00000486612 523 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 MRPL57P6-201ENST00000506570 309 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC093815.1-201ENST00000508637 280 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 IGKV2D-38-201ENST00000518423 240 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.1□□□□□ -1.27
TPM1P09493 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 FAM30C-201ENST00000561158 410 ntBASIC7.1□□□□□ -1.27
TPM1P09493 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.1□□□□□ -1.27
TPM1P09493 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.1□□□□□ -1.27
TPM1P09493 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 AC116165.3-201ENST00000614524 400 ntBASIC7.1□□□□□ -1.27
TPM1P09493 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 AC063952.1-203ENST00000634410 658 ntBASIC7.1□□□□□ -1.27
TPM1P09493 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 AC092724.1-201ENST00000624623 3397 ntBASIC7.1□□□□□ -1.27
TPM1P09493 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM1P09493 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.1□□□□□ -1.27
TPM1P09493 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM1P09493 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM1P09493 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 AL353763.1-201ENST00000624467 1628 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.09□□□□□ -1.27
TPM1P09493 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
TPM1P09493 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.09□□□□□ -1.27
TPM1P09493 RNA5SP478-201ENST00000364657 115 ntBASIC7.09□□□□□ -1.27
TPM1P09493 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM1P09493 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TPM1P09493 RPSAP44-201ENST00000406712 884 ntBASIC7.09□□□□□ -1.27
TPM1P09493 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 PUDPP2-201ENST00000431423 643 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AL390879.1-201ENST00000439143 386 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AC027124.1-201ENST00000440852 466 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 AC009963.4-201ENST00000448535 339 ntBASIC7.09□□□□□ -1.27
TPM1P09493 RPL5P3-201ENST00000493817 889 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM1P09493 AC090058.1-201ENST00000498788 435 ntBASIC7.09□□□□□ -1.27
TPM1P09493 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM1P09493 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.09□□□□□ -1.27
TPM1P09493 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.09□□□□□ -1.27
TPM1P09493 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM1P09493 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.09□□□□□ -1.27
TPM1P09493 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM1P09493 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM1P09493 AC012510.1-201ENST00000607946 759 ntBASIC7.09□□□□□ -1.27
TPM1P09493 MRPL57P3-201ENST00000619218 176 ntBASIC7.09□□□□□ -1.27
TPM1P09493 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.09□□□□□ -1.27
TPM1P09493 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 AC027575.3-201ENST00000583058 2747 ntBASIC7.09□□□□□ -1.27
TPM1P09493 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM1P09493 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.09□□□□□ -1.28
TPM1P09493 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TPM1P09493 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TPM1P09493 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TPM1P09493 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TPM1P09493 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TPM1P09493 AC123769.1-201ENST00000530992 3192 ntBASIC7.08□□□□□ -1.28
TPM1P09493 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TPM1P09493 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TPM1P09493 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM1P09493 AL359092.1-201ENST00000417156 265 ntBASIC7.08□□□□□ -1.28
TPM1P09493 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM1P09493 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM1P09493 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms