Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
APOEP02649 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.88□□□□□ -1.31
APOEP02649 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.87□□□□□ -1.31
APOEP02649 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 AL139384.2-201ENST00000613809 3590 ntBASIC6.87□□□□□ -1.31
APOEP02649 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 AC005618.1-201ENST00000606901 3148 ntBASIC6.87□□□□□ -1.31
APOEP02649 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
APOEP02649 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 RN7SKP188-201ENST00000410789 317 ntBASIC6.87□□□□□ -1.31
APOEP02649 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 GAPDHP19-201ENST00000431768 1005 ntBASIC6.87□□□□□ -1.31
APOEP02649 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.87□□□□□ -1.31
APOEP02649 RPS18P1-201ENST00000447840 458 ntBASIC6.87□□□□□ -1.31
APOEP02649 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.87□□□□□ -1.31
APOEP02649 SULT1D1P-201ENST00000458020 882 ntBASIC6.87□□□□□ -1.31
APOEP02649 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 AL162632.2-201ENST00000553933 399 ntBASIC6.87□□□□□ -1.31
APOEP02649 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.87□□□□□ -1.31
APOEP02649 ARGFXP2-201ENST00000579304 949 ntBASIC6.87□□□□□ -1.31
APOEP02649 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 AL683813.2-201ENST00000605245 502 ntBASIC6.87□□□□□ -1.31
APOEP02649 AC018692.2-201ENST00000624130 348 ntBASIC6.87□□□□□ -1.31
APOEP02649 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 MAPK10-357ENST00000641831 2858 ntBASIC6.87□□□□□ -1.31
APOEP02649 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
APOEP02649 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.87□□□□□ -1.31
APOEP02649 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 AC007012.2-201ENST00000623206 1676 ntBASIC6.87□□□□□ -1.31
APOEP02649 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.87□□□□□ -1.31
APOEP02649 AL359694.2-201ENST00000567753 1615 ntBASIC6.87□□□□□ -1.31
APOEP02649 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
APOEP02649 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 TNPO1P2-201ENST00000426249 2665 ntBASIC6.86□□□□□ -1.31
APOEP02649 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 AC217777.1-201ENST00000570034 1471 ntBASIC6.86□□□□□ -1.31
APOEP02649 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
APOEP02649 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
APOEP02649 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
APOEP02649 U3.52-201ENST00000384034 216 ntBASIC6.86□□□□□ -1.31
APOEP02649 RPL12P23-201ENST00000405880 490 ntBASIC6.86□□□□□ -1.31
APOEP02649 UBTFL2-201ENST00000411859 1191 ntBASIC6.86□□□□□ -1.31
APOEP02649 MTND4LP17-201ENST00000414607 293 ntBASIC6.86□□□□□ -1.31
APOEP02649 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.86□□□□□ -1.31
APOEP02649 Z68868.1-201ENST00000429048 544 ntBASIC6.86□□□□□ -1.31
APOEP02649 AL645939.3-201ENST00000435408 225 ntBASIC6.86□□□□□ -1.31
APOEP02649 AC064862.5-201ENST00000440618 334 ntBASIC6.86□□□□□ -1.31
APOEP02649 GAPDHP37-201ENST00000442317 968 ntBASIC6.86□□□□□ -1.31
APOEP02649 CT45A11P-201ENST00000448043 1134 ntBASIC6.86□□□□□ -1.31
APOEP02649 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
APOEP02649 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.86□□□□□ -1.31
APOEP02649 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC008429.2-201ENST00000523057 864 ntBASIC6.86□□□□□ -1.31
APOEP02649 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.86□□□□□ -1.31
APOEP02649 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
APOEP02649 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.86□□□□□ -1.31
APOEP02649 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.86□□□□□ -1.31
APOEP02649 MIR212-201ENST00000586026 110 ntBASIC6.86□□□□□ -1.31
APOEP02649 AC067852.5-201ENST00000589299 310 ntBASIC6.86□□□□□ -1.31
APOEP02649 OR7A11P-201ENST00000597719 953 ntBASIC6.86□□□□□ -1.31
APOEP02649 AC245052.7-201ENST00000601161 359 ntBASIC6.86□□□□□ -1.31
APOEP02649 AL356986.1-201ENST00000604085 341 ntBASIC6.86□□□□□ -1.31
APOEP02649 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 AC007603.3-201ENST00000636915 979 ntBASIC6.86□□□□□ -1.31
APOEP02649 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.86□□□□□ -1.31
APOEP02649 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
APOEP02649 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms