Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL021807.1-201ENST00000607175 565 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL133481.2-203ENST00000607558 139 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RNU6-84P-201ENST00000607737 102 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC135050.6-202ENST00000613584 392 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 TTR-205ENST00000613781 556 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 STX3-208ENST00000641815 3236 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MTCO1P22-201ENST00000604619 1360 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 OR51H2P-202ENST00000641424 3046 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 PSG10P-201ENST00000501199 1500 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MTCO1P15-201ENST00000529569 1526 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 RPL12P1-201ENST00000374520 498 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MIR433-201ENST00000384837 93 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SNORA48.6-201ENST00000391156 130 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 NANOGP4-201ENST00000427230 913 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL596268.1-201ENST00000427910 1048 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC007000.1-201ENST00000453064 794 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 RPL12P39-201ENST00000455456 496 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ACA64.4-201ENST00000459070 127 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL591473.1-201ENST00000464297 313 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC079080.1-201ENST00000479841 822 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC090638.1-201ENST00000498296 909 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CFI-204ENST00000510800 667 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC098976.1-201ENST00000513014 541 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SCARNA6-201ENST00000515982 265 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AP000763.1-201ENST00000539481 325 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC126615.2-201ENST00000553003 515 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 HP-207ENST00000562526 685 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC099511.1-202ENST00000563923 491 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC133569.1-201ENST00000564327 373 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 EIF4A3P1-201ENST00000578499 647 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL353729.2-201ENST00000605859 1249 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC103724.4-201ENST00000605981 292 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC004908.1-201ENST00000606572 541 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MIR6848-201ENST00000611213 70 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ELMO2P1-202ENST00000614283 794 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MIR6124-201ENST00000617177 85 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL591926.6-201ENST00000617375 415 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MRPL57P1-201ENST00000621486 265 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AC091059.2-201ENST00000623355 614 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms