Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC011921.2-201ENST00000589465 152 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC005858.3-201ENST00000624756 589 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC006453.3-201ENST00000635891 377 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AP000547.3-204ENST00000588548 2523 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RN7SKP118-201ENST00000364331 330 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RN7SKP130-201ENST00000364924 301 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 LDHAP5-201ENST00000394996 622 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AL117344.1-201ENST00000407196 616 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AL136100.1-201ENST00000407696 330 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RPLP1P10-201ENST00000413972 339 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 CYCSP52-201ENST00000422857 310 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AL139415.1-201ENST00000424862 352 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ETF1P1-206ENST00000427296 984 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AL158214.1-201ENST00000444423 404 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RBMY2EP-202ENST00000456360 940 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC091849.1-201ENST00000509920 121 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC010442.1-201ENST00000515583 816 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RNA5SP318-201ENST00000516352 92 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AP005902.2-201ENST00000518393 307 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RBMS2P1-201ENST00000525031 1226 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 SETP17-201ENST00000534163 817 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 PTCHD3P1-201ENST00000612350 537 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC117503.3-201ENST00000623811 601 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC010624.4-201ENST00000597606 1351 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC105749.1-201ENST00000631338 2008 ntBASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDD3Q9Y3P4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDD3Q9Y3P4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms