Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 RPL24P4-201ENST00000326586 421 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 FDPSP5-201ENST00000399474 1057 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NME1P1-201ENST00000420914 382 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 Z82198.3-201ENST00000421145 199 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AL596268.1-201ENST00000427910 1048 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 VN1R53P-201ENST00000429536 957 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NPM1P23-201ENST00000440193 849 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 RN7SL393P-201ENST00000463588 296 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 RN7SL83P-201ENST00000468131 297 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 RPL7AP23-201ENST00000482625 776 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AP004607.6-201ENST00000525033 1202 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC007068.2-201ENST00000543168 395 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 CTSLP2-201ENST00000580501 394 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC012175.1-201ENST00000603755 531 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AL390877.1-201ENST00000605704 214 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC048341.3-201ENST00000619323 491 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 MIR7854-201ENST00000620068 65 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 MIR6503-201ENST00000622884 86 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 SNORA16A-202ENST00000628458 135 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 OLMALINC-203ENST00000641087 3779 ntBASIC6.21□□□□□ -1.42
RTL4Q6ZR62 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.21□□□□□ -1.42
RTL4Q6ZR62 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 RNU1-55P-201ENST00000365510 158 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 SNORA7A-201ENST00000384765 139 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 CRYGGP-201ENST00000443337 145 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 ANP32BP1-202ENST00000568553 737 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 RN7SL270P-201ENST00000579643 281 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms