Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 MAPK10-270ENST00000641102 3538 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 WNK1-220ENST00000574564 1401 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AL627171.1-201ENST00000618845 1308 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
NKX6-1P78426 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 RPL23AP18-201ENST00000416139 468 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AL022324.2-201ENST00000434827 780 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AL731892.1-201ENST00000437364 1192 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 RPL29P7-201ENST00000440227 457 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 RPL6P30-201ENST00000443382 862 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 VN1R6P-201ENST00000458417 907 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC008379.1-201ENST00000463655 464 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 RN7SL251P-201ENST00000464175 297 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 RFPL4AP3-201ENST00000515267 345 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC087894.1-201ENST00000538359 518 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 BTG1P1-201ENST00000540396 508 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC106730.2-201ENST00000566641 540 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 RN7SL426P-201ENST00000579106 295 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AF230666.2-201ENST00000602328 725 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC068802.1-201ENST00000603420 732 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC079880.2-201ENST00000603790 1213 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC009779.8-202ENST00000607990 932 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC109809.1-201ENST00000619665 545 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC007275.1-201ENST00000621243 671 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 AC099667.1-201ENST00000624222 469 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX6-1P78426 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 HSPA8P11-201ENST00000508840 1898 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 SALL1P1-201ENST00000438101 3837 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC003985.2-201ENST00000562268 1669 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NKX6-1P78426 AC027279.1-201ENST00000568885 4284 ntBASIC6.36□□□□□ -1.39
NKX6-1P78426 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
NKX6-1P78426 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.35□□□□□ -1.39
NKX6-1P78426 MTCO1P28-201ENST00000574177 1528 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 CASC19-243ENST00000641588 1546 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 AC091544.5-201ENST00000620192 3815 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 CAP1P2-201ENST00000417455 1409 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.35□□□□□ -1.39
NKX6-1P78426 AL031651.1-201ENST00000615357 1438 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NKX6-1P78426 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NKX6-1P78426 AL645568.2-201ENST00000432815 1337 ntBASIC6.35□□□□□ -1.39
NKX6-1P78426 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX6-1P78426 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NKX6-1P78426 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms