Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A1P61619 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC115223.1-201ENST00000466377 870 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AC022730.1-201ENST00000473114 568 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 RN7SL849P-201ENST00000485236 295 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AL133372.1-201ENST00000493565 745 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A1P61619 SNORD116-30-201ENST00000516468 85 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC100854.1-201ENST00000520351 341 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 OR5M6P-201ENST00000530227 937 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC092375.1-201ENST00000550410 637 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC063962.1-201ENST00000608199 521 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AL138960.1-201ENST00000613838 513 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 RN7SL126P-201ENST00000616400 299 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A1P61619 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A1P61619 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A1P61619 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A1P61619 AC067942.1-201ENST00000488045 1493 ntBASIC5.89□□□□□ -1.47
SEC61A1P61619 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A1P61619 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A1P61619 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SEC61A1P61619 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 MAPK10-357ENST00000641831 2858 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 RNA5SP514-201ENST00000363717 111 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 RNU1-56P-201ENST00000391303 164 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 TVP23CP1-201ENST00000450317 639 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AC128716.1-201ENST00000475129 166 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 RN7SL868P-201ENST00000485915 303 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AC084337.1-201ENST00000524809 686 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 PHBP2-201ENST00000532859 806 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC069240.2-201ENST00000550242 609 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC234775.3-201ENST00000564612 656 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 AC005229.3-201ENST00000603438 323 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 BNIP3P7-201ENST00000605641 516 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 SNX18P10-201ENST00000625014 519 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 AP002800.1-201ENST00000624982 2225 ntBASIC5.88□□□□□ -1.47
SEC61A1P61619 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A1P61619 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A1P61619 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A1P61619 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A1P61619 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms