Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 AC092106.2-201ENST00000436597 487 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 GAPDHP37-201ENST00000442317 968 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 RPS18P1-201ENST00000447840 458 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 SULT1D1P-201ENST00000458020 882 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 AL162632.2-201ENST00000553933 399 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 ARGFXP2-201ENST00000579304 949 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 AC011497.2-201ENST00000600255 639 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 AC005277.2-201ENST00000617898 390 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.42□□□□□ -1.38
SHMT2P34897 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
SHMT2P34897 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 AC073365.1-203ENST00000641055 1992 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 AC007485.2-201ENST00000623493 1667 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 AC217777.1-201ENST00000570034 1471 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AP000547.3-204ENST00000588548 2523 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 OR2M1P-201ENST00000318104 951 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 UBTFL2-201ENST00000411859 1191 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 AL359092.1-201ENST00000417156 265 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 Z82198.3-201ENST00000421145 199 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 COL11A2P1-205ENST00000441798 676 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC015524.1-201ENST00000491585 472 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.41□□□□□ -1.38
SHMT2P34897 MIR4732-201ENST00000581873 76 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 OR7A11P-201ENST00000597719 953 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 AC114477.1-201ENST00000605097 605 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 SNORD96A-201ENST00000606577 79 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 HTR1DP1-201ENST00000616500 888 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 AC018692.2-201ENST00000624130 348 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 AC007012.2-201ENST00000623206 1676 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 AC009135.2-201ENST00000624136 1768 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.41□□□□□ -1.38
SHMT2P34897 AL031123.3-201ENST00000623345 1837 ntBASIC6.41□□□□□ -1.38
SHMT2P34897 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.41□□□□□ -1.38
SHMT2P34897 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHMT2P34897 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.41□□□□□ -1.38
SHMT2P34897 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.4□□□□□ -1.38
SHMT2P34897 AP003486.1-201ENST00000525716 3994 ntBASIC6.4□□□□□ -1.38
SHMT2P34897 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHMT2P34897 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHMT2P34897 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHMT2P34897 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.4□□□□□ -1.38
SHMT2P34897 MRPS6P2-201ENST00000381143 370 ntBASIC6.4□□□□□ -1.38
SHMT2P34897 U3.52-201ENST00000384034 216 ntBASIC6.4□□□□□ -1.38
SHMT2P34897 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.4□□□□□ -1.38
SHMT2P34897 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.4□□□□□ -1.38
SHMT2P34897 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.4□□□□□ -1.38
SHMT2P34897 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.4□□□□□ -1.38
SHMT2P34897 Z68868.1-201ENST00000429048 544 ntBASIC6.4□□□□□ -1.38
SHMT2P34897 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHMT2P34897 AL645939.3-201ENST00000435408 225 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms