Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 RNU6-252P-201ENST00000363232 107 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 RNA5SP114-201ENST00000363780 113 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 RNU1-56P-201ENST00000391303 164 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 MTATP6P20-201ENST00000414147 562 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 XIST-201ENST00000416330 750 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 FBP2P1-202ENST00000424473 530 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AKR1B10P1-201ENST00000425765 942 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 MTND2P5-201ENST00000432656 1006 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 RPS7P2-201ENST00000435134 607 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 Z84478.1-201ENST00000438230 1219 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC044797.1-201ENST00000445744 679 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 EIF2S2P2-201ENST00000447161 982 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 OR7E7P-201ENST00000455678 1012 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC092691.2-201ENST00000461787 803 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 RPL5P13-201ENST00000462840 709 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 MRPL57P6-201ENST00000506570 309 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 SCARNA18.2-201ENST00000516882 84 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC131935.1-201ENST00000524621 333 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AP006587.5-201ENST00000532033 739 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AP000916.1-201ENST00000533869 835 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 NDUFA3P4-201ENST00000560814 250 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.41□□□□□ -1.06
ERCC3P19447 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 AL160237.3-201ENST00000604114 1013 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.41□□□□□ -1.06
ERCC3P19447 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
ERCC3P19447 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ERCC3P19447 AC006116.1-201ENST00000587908 2171 ntBASIC8.41□□□□□ -1.06
ERCC3P19447 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.4□□□□□ -1.06
ERCC3P19447 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
ERCC3P19447 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.4□□□□□ -1.06
ERCC3P19447 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.4□□□□□ -1.06
ERCC3P19447 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 RN7SKP118-201ENST00000364331 330 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 SNORA70.5-201ENST00000365519 135 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 MIR575-201ENST00000385013 94 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AL034417.1-201ENST00000399343 800 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC114402.2-201ENST00000432760 643 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 PSMD8P1-201ENST00000436275 769 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.4□□□□□ -1.06
ERCC3P19447 PMS2P11-201ENST00000451831 574 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.4□□□□□ -1.06
ERCC3P19447 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.4□□□□□ -1.06
ERCC3P19447 MYL6P4-201ENST00000477911 453 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ERCC3P19447 LARP7P4-201ENST00000481075 878 ntBASIC8.4□□□□□ -1.06
ERCC3P19447 RN7SL849P-201ENST00000485236 295 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms