Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TAAR3P-201ENST00000466706 1078 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 PRDX3P4-201ENST00000470828 747 ntBASIC8.23□□□□□ -1.09
LIG1P18858 TAAR3P-202ENST00000481759 1025 ntBASIC8.23□□□□□ -1.09
LIG1P18858 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.23□□□□□ -1.09
LIG1P18858 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 AC069306.1-201ENST00000507006 843 ntBASIC8.23□□□□□ -1.09
LIG1P18858 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC8.23□□□□□ -1.09
LIG1P18858 AC068631.3-201ENST00000538831 225 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC023825.1-201ENST00000566704 1030 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AGGF1P6-201ENST00000569213 976 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.23□□□□□ -1.09
LIG1P18858 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
LIG1P18858 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC8.23□□□□□ -1.09
LIG1P18858 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.23□□□□□ -1.09
LIG1P18858 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 AL355333.1-201ENST00000605632 279 ntBASIC8.23□□□□□ -1.09
LIG1P18858 CUX2P1-201ENST00000606426 298 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC013562.2-201ENST00000611632 603 ntBASIC8.23□□□□□ -1.09
LIG1P18858 RNU6-1192P-201ENST00000612197 107 ntBASIC8.23□□□□□ -1.09
LIG1P18858 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AP003789.1-201ENST00000617737 605 ntBASIC8.23□□□□□ -1.09
LIG1P18858 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 RNU6-489P-201ENST00000618289 107 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC091304.6-201ENST00000619761 202 ntBASIC8.23□□□□□ -1.09
LIG1P18858 AC021422.1-201ENST00000621212 473 ntBASIC8.23□□□□□ -1.09
LIG1P18858 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.23□□□□□ -1.09
LIG1P18858 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.23□□□□□ -1.09
LIG1P18858 AC090220.1-201ENST00000593078 1699 ntBASIC8.23□□□□□ -1.09
LIG1P18858 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.23□□□□□ -1.09
LIG1P18858 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.23□□□□□ -1.09
LIG1P18858 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.23□□□□□ -1.09
LIG1P18858 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LIG1P18858 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 RPL12P13-201ENST00000310055 497 ntBASIC8.22□□□□□ -1.09
LIG1P18858 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
LIG1P18858 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.22□□□□□ -1.09
LIG1P18858 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 TRIM60P5Y-201ENST00000413946 574 ntBASIC8.22□□□□□ -1.09
LIG1P18858 MTCO3P4-201ENST00000419236 787 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 VDAC2P3-201ENST00000430995 828 ntBASIC8.22□□□□□ -1.09
LIG1P18858 MTND2P40-201ENST00000436718 841 ntBASIC8.22□□□□□ -1.09
LIG1P18858 MTND4P6-201ENST00000438297 472 ntBASIC8.22□□□□□ -1.09
LIG1P18858 MTCYBP12-201ENST00000440559 1134 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AC069540.1-201ENST00000446320 988 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AL031313.1-201ENST00000448435 256 ntBASIC8.22□□□□□ -1.09
LIG1P18858 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.22□□□□□ -1.09
LIG1P18858 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 OR6C72P-201ENST00000451403 892 ntBASIC8.22□□□□□ -1.09
LIG1P18858 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.22□□□□□ -1.09
LIG1P18858 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.22□□□□□ -1.09
LIG1P18858 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 AC097263.1-201ENST00000496795 606 ntBASIC8.22□□□□□ -1.09
LIG1P18858 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.22□□□□□ -1.09
LIG1P18858 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC8.22□□□□□ -1.09
LIG1P18858 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC8.22□□□□□ -1.09
LIG1P18858 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 AL356057.1-201ENST00000533798 831 ntBASIC8.22□□□□□ -1.09
LIG1P18858 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 COX6CP11-201ENST00000555293 229 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AL132640.1-201ENST00000559594 619 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.22□□□□□ -1.09
LIG1P18858 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.22□□□□□ -1.09
LIG1P18858 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 AC097381.3-201ENST00000608962 462 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AC008115.4-201ENST00000619780 775 ntBASIC8.22□□□□□ -1.09
LIG1P18858 uc_338.21-201ENST00000622458 147 ntBASIC8.22□□□□□ -1.09
LIG1P18858 AP001962.1-201ENST00000624114 559 ntBASIC8.22□□□□□ -1.09
LIG1P18858 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
LIG1P18858 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LIG1P18858 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.22□□□□□ -1.09
LIG1P18858 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms