Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RNA5SP110-201ENST00000362638 115 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 PRELID1P1-201ENST00000403549 660 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 FABP5P1-201ENST00000423401 411 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 VN1R20P-201ENST00000425215 966 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RPL5P7-201ENST00000444235 813 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC007383.1-201ENST00000445875 636 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 TVP23CP1-201ENST00000450317 639 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 H3F3AP5-201ENST00000475267 429 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC026254.2-201ENST00000475295 371 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 SYPL1P2-201ENST00000582878 727 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC010998.3-201ENST00000613871 631 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AL359742.1-201ENST00000622497 540 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC073593.1-201ENST00000624500 411 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 YWHAZP4-201ENST00000392459 708 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RN7SKP281-201ENST00000410472 352 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC108479.1-201ENST00000431142 427 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 SNX18P24-201ENST00000505249 671 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 RPL3P13-201ENST00000550415 216 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 MIR3154-201ENST00000577829 84 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 CDY5P-201ENST00000411487 1580 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 CDY9P-201ENST00000451397 1580 ntBASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
KIAA1549Q9HCM3 AC092725.2-201ENST00000567658 1389 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC010624.4-201ENST00000597606 1351 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 TNPO1P2-201ENST00000426249 2665 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC018717.1-201ENST00000457712 1505 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC022507.1-201ENST00000548349 1505 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 RNA5SP485-201ENST00000365053 119 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 RNU1-46P-201ENST00000384425 164 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 RPS7P8-201ENST00000418311 581 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC092865.3-201ENST00000425390 1026 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AL358876.1-201ENST00000453364 1075 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC091965.3-201ENST00000506236 208 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 KCTD9P4-201ENST00000526766 1166 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC026826.3-201ENST00000561747 158 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC009120.3-201ENST00000563335 499 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 MIR3189-201ENST00000578735 73 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 MIR4271-201ENST00000582451 67 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms