Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX3Q99909 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX3Q99909 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
SSX3Q99909 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 PDCL3P5-201ENST00000398028 722 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX3Q99909 DUTP4-201ENST00000424782 475 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX3Q99909 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 OR7E7P-201ENST00000455678 1012 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 AC126615.1-201ENST00000470084 630 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AC131233.1-201ENST00000479200 955 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSX3Q99909 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC130366.1-201ENST00000526505 1192 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 GLYATL1P4-201ENST00000529326 906 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 OR4A6P-201ENST00000534364 970 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX3Q99909 RN7SL426P-201ENST00000579106 295 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC022001.1-201ENST00000605193 268 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AC096586.2-201ENST00000610260 441 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AL161420.1-201ENST00000619393 264 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AC087894.3-201ENST00000623682 349 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 AC018659.2-201ENST00000624690 715 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 DNM1P47-203ENST00000571780 12667 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX3Q99909 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX3Q99909 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SSX3Q99909 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX3Q99909 AC092111.2-201ENST00000611627 1414 ntBASIC5.73□□□□□ -1.49
SSX3Q99909 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSX3Q99909 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 AC010401.2-201ENST00000575137 4934 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC090774.4-201ENST00000578888 1372 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX3Q99909 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 OR56A4-201ENST00000330728 1209 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 FAM204BP-201ENST00000369171 701 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 MTND4LP21-201ENST00000415303 295 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC117434.1-201ENST00000419971 836 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 GAPDHP69-201ENST00000425504 1008 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC009518.3-201ENST00000438972 253 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC027124.1-201ENST00000440852 466 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 MTND4LP12-201ENST00000448237 295 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC009244.1-201ENST00000450566 258 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 NUCKS1P1-201ENST00000452067 703 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 BX323845.2-201ENST00000458382 234 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 RN7SL868P-201ENST00000485915 303 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 RN7SL797P-201ENST00000486314 297 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC122714.1-201ENST00000502510 459 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC008868.1-201ENST00000509786 737 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 OR10J9P-201ENST00000511932 987 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 DCAF13P2-201ENST00000514188 555 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms