Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 HPVC1-201ENST00000629899 1198 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC061975.7-201ENST00000592016 2692 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 FO082842.1-201ENST00000423552 1370 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 MTCO1P22-201ENST00000604619 1360 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC095038.1-201ENST00000429248 1591 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC092701.1-201ENST00000623627 1551 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC006600.2-201ENST00000624834 2506 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC126474.2-201ENST00000623268 1750 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC079248.1-201ENST00000427568 1546 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 RN7SKP257-201ENST00000364525 309 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 UBBP1-201ENST00000392399 473 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 LDHAP5-201ENST00000394996 622 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AL049697.3-201ENST00000406493 982 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 MEAF6P1-201ENST00000416092 327 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 ETF1P1-206ENST00000427296 984 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 SCARNA11.1-201ENST00000516918 132 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 OR4A13P-201ENST00000529316 942 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 PHBP2-201ENST00000532859 806 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 SETP17-201ENST00000534163 817 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC091304.4-201ENST00000565703 620 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC011921.2-201ENST00000589465 152 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC092944.2-201ENST00000605443 889 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AL445647.2-201ENST00000615170 130 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 MTCO1P25-201ENST00000414449 1799 ntBASIC7.54□□□□□ -1.2
CDK5RAP3Q96JB5 KYNUP2-201ENST00000582280 1329 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC104162.1-201ENST00000430831 2382 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 RN7SKP91-201ENST00000410852 288 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 RN7SKP296-201ENST00000411185 341 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL713922.1-201ENST00000416477 747 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 GAPDHP20-201ENST00000444107 1007 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL845321.1-201ENST00000444603 348 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL354872.1-201ENST00000456361 967 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 UOX-201ENST00000471089 899 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC093878.1-201ENST00000515630 432 ntBASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.53□□□□□ -1.2
CDK5RAP3Q96JB5 AL049874.4-201ENST00000557593 255 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms