Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 EIF4A3P1-201ENST00000578499 647 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 MIR1273F-201ENST00000580581 99 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 pRNA.9-201ENST00000618609 89 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC025287.2-201ENST00000621911 668 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC087894.3-201ENST00000623682 349 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AP001153.1-201ENST00000641024 338 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 DLEU2L-201ENST00000371086 3555 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC233968.1-201ENST00000611212 1300 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 VN1R3-201ENST00000418822 919 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC245452.2-201ENST00000435222 392 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 MTND4LP12-201ENST00000448237 295 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 RPS26P11-201ENST00000463445 348 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 TUBBP11-201ENST00000472255 252 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC079944.1-201ENST00000485426 495 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC026782.2-201ENST00000510845 636 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 SCARNA18.2-201ENST00000516882 84 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC011193.2-201ENST00000582638 367 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC011447.2-201ENST00000592921 283 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC020914.7-201ENST00000594477 545 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AL035410.2-201ENST00000604963 864 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC012640.3-201ENST00000607847 430 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC096992.2-201ENST00000609553 1684 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 AC005332.9-201ENST00000620266 2921 ntBASIC5.85□□□□□ -1.47
RFT1Q96AA3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
RFT1Q96AA3 ATP5BP1-201ENST00000411980 1574 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC011369.2-201ENST00000624423 1567 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 RACGAP1P-201ENST00000550663 1879 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AC023886.2-201ENST00000321285 411 ntBASIC5.84□□□□□ -1.47
RFT1Q96AA3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.84□□□□□ -1.47
RFT1Q96AA3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms